Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BE843_RS12310 Genome accession   NZ_CP016872
Coordinates   2713951..2714742 (+) Length   263 a.a.
NCBI ID   WP_042646110.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain FFI104     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2708951..2719742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE843_RS12285 (BE843_12285) def 2709678..2710190 (+) 513 WP_010948295.1 peptide deformylase -
  BE843_RS12290 (BE843_12290) fmt 2710187..2711131 (+) 945 WP_013101888.1 methionyl-tRNA formyltransferase -
  BE843_RS12295 (BE843_12295) rsmB 2711128..2712411 (+) 1284 WP_070322316.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BE843_RS12300 (BE843_12300) - 2712408..2713157 (+) 750 WP_011947517.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  BE843_RS12305 (BE843_12305) ceg33 2713331..2713834 (+) 504 WP_011947516.1 Dot/Icm T4SS effector Ceg33 -
  BE843_RS12310 (BE843_12310) spo0J 2713951..2714742 (+) 792 WP_042646110.1 ParB/RepB/Spo0J family partition protein Regulator
  BE843_RS12315 (BE843_12315) dacB 2714834..2716627 (+) 1794 WP_010948289.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  BE843_RS12320 (BE843_12320) legS1 2717433..2718590 (+) 1158 WP_011947512.1 Dot/Icm T4SS effector LegS1 -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30163.38 Da        Isoelectric Point: 5.9797

>NTDB_id=164777 BE843_RS12310 WP_042646110.1 2713951..2714742(+) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI104]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFG
HARVLVGLNPEQQEMFAHQIIGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=164777 BE843_RS12310 WP_042646110.1 2713951..2714742(+) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI104]
ATGCAAACCCGATTTACTTATTTACCTGTCACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATCGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCTGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGCGTTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAACAACAAGAAATGTTTGCTCACCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATTTTATAAAAATAAAGATATGAATAGCCCAAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCTTGGCTGAACAAGTGGGAGCTCCTGTACAAATTATAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGTTTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

37.308

98.859

0.369