Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BE842_RS08805 Genome accession   NZ_CP016870
Coordinates   1994235..1995026 (-) Length   263 a.a.
NCBI ID   WP_011216467.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain FFI103     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1989235..2000026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE842_RS08795 (BE842_08795) legS1 1990541..1991698 (-) 1158 WP_011216465.1 Dot/Icm T4SS effector LegS1 -
  BE842_RS08800 (BE842_08800) dacB 1992350..1994143 (-) 1794 WP_011216466.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  BE842_RS08805 (BE842_08805) spo0J 1994235..1995026 (-) 792 WP_011216467.1 ParB/RepB/Spo0J family partition protein Regulator
  BE842_RS08810 (BE842_08810) ceg33 1995143..1995646 (-) 504 WP_011216468.1 Dot/Icm T4SS effector Ceg33 -
  BE842_RS08815 (BE842_08815) - 1995820..1996569 (-) 750 WP_011216469.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  BE842_RS08820 (BE842_08820) rsmB 1996566..1997849 (-) 1284 WP_011216470.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BE842_RS08825 (BE842_08825) fmt 1997846..1998790 (-) 945 WP_011216471.1 methionyl-tRNA formyltransferase -
  BE842_RS08830 (BE842_08830) def 1998787..1999299 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30142.30 Da        Isoelectric Point: 6.2513

>NTDB_id=164698 BE842_RS08805 WP_011216467.1 1994235..1995026(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI103]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFG
HARVLVGLNPEQQEMFAHQVIGEEWSVRHLEQEIKSYKNKDTNRPKNPRKDRDIERLQTILAEQVGAPVQIVNDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=164698 BE842_RS08805 WP_011216467.1 1994235..1995026(-) (spo0J) [Legionella pneumophila subsp. pneumophila strain FFI103]
ATGCAAACCCGATTTACTTATTTACCTGTTACAAGCCTACAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTAGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAAC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGCCAGGATTTGAATTTAATTGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCAGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGTATTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAACAGCAAGAAATGTTTGCTCACCAGGTTATTGGAGAGGAATGGTCTGT
CAGGCACTTAGAGCAAGAAATTAAATCTTATAAAAATAAAGATACGAACAGGCCCAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCCTGGCTGAACAAGTGGGGGCTCCTGTACAAATTGTAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGATTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(146-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

37.308

98.859

0.369