Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   BE841_RS00375 Genome accession   NZ_CP016868
Coordinates   89945..91207 (-) Length   420 a.a.
NCBI ID   WP_011216388.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain FFI102     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 84945..96207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE841_RS00360 (BE841_00360) dupB 85118..86311 (+) 1194 WP_080020750.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -
  BE841_RS00365 (BE841_00365) sdjA 86382..88805 (+) 2424 WP_011216390.1 Dot/Icm T4SS effector SdjA -
  BE841_RS00370 (BE841_00370) - 89202..89897 (+) 696 WP_011216389.1 iron-containing redox enzyme family protein -
  BE841_RS00375 (BE841_00375) lqsT 89945..91207 (-) 1263 WP_011216388.1 sensor histidine kinase Regulator
  BE841_RS00380 (BE841_00380) mesI 91602..92489 (-) 888 WP_080020749.1 Dot/Icm T4SS effector metaeffector MesI -
  BE841_RS00385 (BE841_00385) ceg32 92491..95319 (-) 2829 WP_011216386.1 Dot/Icm T4SS effector Ceg32/SidI -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 48598.99 Da        Isoelectric Point: 7.9744

>NTDB_id=164590 BE841_RS00375 WP_011216388.1 89945..91207(-) (lqsT) [Legionella pneumophila subsp. pneumophila strain FFI102]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALVLLVSGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFAIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKDGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=164590 BE841_RS00375 WP_011216388.1 89945..91207(-) (lqsT) [Legionella pneumophila subsp. pneumophila strain FFI102]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTACCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCAACTCTTTGGCTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTAGTCTCCAGTGTGTTGGGAGCTCTTGTAT
TGCTTGTATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCTTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCGGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGTATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTGCGATTTATTCCATCAAAAAATTACTCAAGGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGATGGAACTGGTTTAGGCTTGGCCTATTGCAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCGTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAA

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(310-417)

His Kinase A (phospho-acceptor) domain (HisKA)

(198-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

99.048

100

0.99