Detailed information NTG0164101

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AT984_RS14365
• Genome accession: NZ_CP013692
• Coordinates: 3311909..3313192 (-)
• Length: 427 a.a.
• NCBI ID: WP_058720679.1
• Uniprot ID: A0A0U3F005
• Organism: Paucibacter sp. KCTC 42545
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3306909..3318192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AT984_RS14345 (AT984_14345)	-	3307217..3309175 (-)	1959	WP_082680037.1	PAS domain-containing sensor histidine kinase	-
AT984_RS14350 (AT984_14350)	-	3309178..3309447 (-)	270	WP_058720676.1	PP0621 family protein	-
AT984_RS14355 (AT984_14355)	ccsA	3309488..3310360 (-)	873	WP_058720677.1	cytochrome c biogenesis protein CcsA	-
AT984_RS14360 (AT984_14360)	ffh	3310412..3311797 (+)	1386	WP_058720678.1	signal recognition particle protein	-
AT984_RS14365 (AT984_14365)	pilA	3311909..3313192 (-)	1284	WP_058720679.1	signal recognition particle-docking protein FtsY	Machinery gene
AT984_RS14370 (AT984_14370)	-	3313336..3314256 (+)	921	WP_058720680.1	delta(1)-pyrroline-2-carboxylate reductase family protein	-
AT984_RS14380 (AT984_14380)	-	3314615..3316429 (-)	1815	WP_082680038.1	long-chain fatty acid--CoA ligase	-
AT984_RS14385 (AT984_14385)	-	3316483..3317364 (-)	882	WP_058720681.1	3-keto-5-aminohexanoate cleavage protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 44658.74 Da
• Isoelectric Point: 4.8894

>NTDB_id=164101 AT984_RS14365 WP_058720679.1 3311909..3313192(-) (pilA) [Paucibacter sp. KCTC 42545]
MFSFLKKKLFGEAPAPAPAPVAEVSPVAVNLPEPAAVPVPVLAPAVPALPEVSPEPVVVDATPEVEPEALPPVVQPPAPI
ESPVLVQSVAAPAPQSVPVPVPVPVPVPVPVPAPAPAPAPAPAPAPAEPRRSWIDKLRQGLRKTGSSIAQVFTGTQIDDE
LYEELEAALLMADAGVKATEFLLADLKRRVKESKATDPQAVRGLLVEALAELLKPLEKSLAVGLHTPTVMMVVGVNGAGK
TTSIGKLTRHLAEADQKVLLAAADTFRAAAREQLSVWADRTQVQIISQEGGDPASVTFDAVNAGRARGCDVVIADTAGRL
PTQLHLMEELKKIKRVITKAQADAPHEVLLVVDGNTGQNALSQVKSFDDALGLTGLIVTKLDGTAKGGVLAAIARERAIP
VYFIGVGEKLEDLQTFNAREFAQALLE

Nucleotide

• Length: 1284 bp

>NTDB_id=164101 AT984_RS14365 WP_058720679.1 3311909..3313192(-) (pilA) [Paucibacter sp. KCTC 42545]
ATGTTTAGTTTCCTCAAGAAAAAATTGTTCGGCGAAGCGCCGGCGCCTGCTCCAGCTCCTGTGGCCGAAGTGTCGCCGGT
CGCCGTGAACCTGCCTGAGCCGGCCGCTGTGCCGGTGCCTGTGCTCGCGCCTGCGGTCCCGGCATTGCCTGAAGTGAGTC
CTGAGCCAGTCGTGGTGGATGCCACGCCTGAAGTTGAGCCTGAGGCTTTGCCGCCGGTCGTGCAGCCTCCGGCGCCCATC
GAATCGCCTGTGCTTGTTCAGTCAGTCGCGGCACCAGCACCACAATCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCCAGT
GCCAGTGCCAGTGCCAGCTCCCGCTCCCGCACCTGCGCCTGCGCCTGCGCCTGCGCCTGCCGAACCGCGCCGCAGTTGGA
TCGATAAGCTGCGCCAAGGCCTGCGCAAGACCGGCTCCAGCATCGCTCAGGTCTTCACCGGCACGCAGATTGATGACGAG
CTGTACGAAGAGCTGGAGGCGGCCTTGCTGATGGCCGATGCGGGCGTCAAGGCCACCGAGTTCTTGTTGGCCGACTTGAA
GCGCCGGGTCAAAGAGTCGAAGGCGACGGATCCGCAAGCCGTGCGTGGTTTGTTGGTGGAGGCGCTGGCCGAACTGCTCA
AGCCCTTGGAAAAATCCTTGGCGGTGGGCTTGCATACGCCCACGGTGATGATGGTGGTGGGCGTCAACGGCGCCGGCAAG
ACGACCAGCATCGGCAAGCTCACCAGGCATCTGGCCGAAGCCGATCAGAAGGTCTTGCTGGCGGCGGCCGATACCTTCCG
CGCGGCGGCGCGCGAGCAGTTATCGGTTTGGGCCGACCGCACCCAGGTGCAGATCATCAGCCAAGAGGGCGGTGACCCGG
CTTCGGTGACTTTTGATGCCGTCAATGCCGGCCGTGCACGCGGCTGCGATGTGGTGATTGCCGATACGGCCGGTCGCCTG
CCGACTCAGCTGCATCTGATGGAAGAGCTGAAGAAGATCAAGCGCGTCATCACCAAAGCACAGGCCGACGCGCCGCACGA
GGTCTTGCTGGTGGTGGATGGCAATACCGGGCAGAACGCACTCAGCCAGGTCAAGTCATTCGACGATGCGCTGGGCCTCA
CCGGCCTGATCGTTACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCGGCCATTGCGCGCGAGCGGGCCATCCCG
GTCTACTTCATCGGCGTGGGTGAGAAGTTGGAAGACTTGCAGACCTTCAATGCGCGCGAGTTCGCGCAAGCGCTGCTGGA
GTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (227-426)

• SRP54-type protein, helical bundle domain (SRP54_N) (145-209)

3D structure

• AlphaFold DB: A0A0U3F005

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	46.606	100	0.482