Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AT984_RS01795 Genome accession   NZ_CP013692
Coordinates   399880..400299 (+) Length   139 a.a.
NCBI ID   WP_058718642.1    Uniprot ID   A0A0U2LNR3
Organism   Paucibacter sp. KCTC 42545     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 394880..405299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT984_RS01770 (AT984_01770) mpl 394912..396285 (-) 1374 WP_058718638.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase -
  AT984_RS01775 (AT984_01775) - 396323..396997 (-) 675 WP_058718639.1 HAD family phosphatase -
  AT984_RS01780 (AT984_01780) hemL 397018..398304 (-) 1287 WP_058718640.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AT984_RS01785 (AT984_01785) - 398388..399380 (-) 993 WP_058718641.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AT984_RS01790 (AT984_01790) - 399625..399777 (+) 153 WP_058722014.1 rubredoxin -
  AT984_RS01795 (AT984_01795) pilG 399880..400299 (+) 420 WP_058718642.1 response regulator Regulator
  AT984_RS01800 (AT984_01800) - 400369..400740 (+) 372 WP_058718643.1 response regulator -
  AT984_RS01805 (AT984_01805) - 400737..401315 (+) 579 WP_058718644.1 chemotaxis protein CheW -
  AT984_RS01810 (AT984_01810) - 401493..403829 (+) 2337 WP_058718645.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 139 a.a.        Molecular weight: 15216.53 Da        Isoelectric Point: 7.8571

>NTDB_id=164095 AT984_RS01795 WP_058718642.1 399880..400299(+) (pilG) [Paucibacter sp. KCTC 42545]
MQVPDGPTGLDSGTPAAAARVLVIDDSNTIRRSAEIFLKQAGHDIVLAEDGFDALAKLSDFRPDLVFCDILMPRLDGYQT
CAIIKRNPQFAAVPVIMLSSKDGLFDKARGRMVGSQDYLTKPFTKDQLLKAVQQHRRGA

Nucleotide


Download         Length: 420 bp        

>NTDB_id=164095 AT984_RS01795 WP_058718642.1 399880..400299(+) (pilG) [Paucibacter sp. KCTC 42545]
GTGCAAGTTCCTGATGGTCCTACCGGTCTTGACAGCGGTACTCCTGCTGCTGCAGCACGAGTGCTGGTCATTGATGACAG
CAACACAATCCGGCGCAGTGCCGAGATTTTCCTGAAACAGGCTGGCCATGACATCGTCCTGGCCGAAGATGGCTTTGATG
CGCTGGCCAAGCTCAGCGACTTCCGGCCCGATCTGGTGTTCTGCGACATCCTGATGCCGCGGCTCGATGGCTATCAAACC
TGCGCCATCATCAAACGCAATCCGCAGTTTGCGGCCGTGCCGGTGATCATGCTGTCCTCCAAGGACGGCTTGTTCGATAA
GGCACGCGGCCGCATGGTGGGCTCGCAAGACTACCTCACCAAACCTTTCACCAAAGACCAGTTGCTGAAGGCCGTGCAGC
AGCACCGCCGTGGCGCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(21-133)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U2LNR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.207

83.453

0.511

Multiple sequence alignment