Detailed information NTG0164065

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: AU077_RS08130
• Genome accession: NZ_CP013688
• Coordinates: 1625424..1626353 (-)
• Length: 309 a.a.
• NCBI ID: WP_014293979.1
• Uniprot ID: A0A0E2PYD4
• Organism: Streptococcus gallolyticus strain ICDDRB-NRC-S1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1620424..1631353

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AU077_RS08130 (AU077_08130)	amiF	1625424..1626353 (-)	930	WP_014293979.1	ABC transporter ATP-binding protein	Regulator
AU077_RS08135 (AU077_08135)	oppD	1626353..1627399 (-)	1047	WP_014293978.1	ABC transporter ATP-binding protein	Regulator
AU077_RS08140 (AU077_08140)	-	1627411..1628442 (-)	1032	WP_014293977.1	ABC transporter permease	-
AU077_RS08145 (AU077_08145)	-	1628453..1629367 (-)	915	WP_058621888.1	ABC transporter permease	-
AU077_RS08150 (AU077_08150)	-	1629478..1631133 (-)	1656	WP_014293975.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35071.80 Da
• Isoelectric Point: 5.4462

>NTDB_id=164065 AU077_RS08130 WP_014293979.1 1625424..1626353(-) (amiF) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MTENRKKLVELKNVSLTFNEGKKNEVKAIDNISFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINKGEIDFDGETISHL
KGKELHEFRKNAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLVNSKEERDQKVQDLLALVGLNKDHSTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLTAIPEPDPESERNRIHEEYDPSAELDGQPREMREITPGHFVFCTEAEAEVYKQEL

Nucleotide

• Length: 930 bp

>NTDB_id=164065 AU077_RS08130 WP_014293979.1 1625424..1626353(-) (amiF) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTATCATTGACTTTTAACGAAGGTAAAAAGAACGAAGTAAA
AGCTATTGATAATATCAGTTTTGATATTTACGAAGGTGAAGTTTTCGGTCTTGTTGGAGAATCAGGTTCTGGTAAGACAA
CTGTTGGTCGTGCTATTTTGAAATTGTACGACATTAATAAAGGTGAAATTGATTTTGATGGTGAAACTATCTCTCATCTT
AAAGGGAAAGAACTGCACGAATTCCGTAAAAATGCTCAAATGATTTTCCAAGACCCACAAGCTAGTCTTAATGGTCGTAT
GAAAATTCGTGACATTGTTGCGGAAGGACTTGACATCCATAAATTAGTTAACAGTAAAGAAGAACGTGACCAAAAAGTTC
AAGATTTACTTGCTTTAGTTGGACTTAACAAAGACCATTCAACACGCTATCCACATGAATTTTCAGGTGGACAACGTCAA
CGTATTGGTATCGCTCGTGCTCTTGCTGTTGAACCAAAGTTCATCATTGCCGATGAACCAATTTCAGCCCTTGACGTGTC
AATCCAAGCTCAAGTTGTTAACCTTATGCAAAAACTTCAAAGAGAACAGGGGTTAACATATCTCTTTATCGCTCACGATT
TGTCAATGGTTAAATACATCTCAGATCGTATTGGGGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGATGAT
GTCTATAATCATCCAATTCACCCATATACTAAGAGCTTATTGACCGCAATTCCAGAACCAGACCCAGAATCTGAAAGAAA
TCGTATCCATGAAGAATACGATCCAAGTGCAGAACTAGATGGTCAACCACGTGAAATGCGTGAAATTACACCTGGCCACT
TTGTTTTTTGTACAGAAGCAGAAGCAGAAGTTTATAAACAAGAATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-272)

• ABC transporter (ABC_tran) (30-181)

3D structure

• AlphaFold DB: A0A0E2PYD4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.426	98.706	0.537
amiF	Streptococcus salivarius strain HSISS4	54.426	98.706	0.537
amiF	Streptococcus thermophilus LMG 18311	54.098	98.706	0.534