Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AU077_RS07945 Genome accession   NZ_CP013688
Coordinates   1591561..1592286 (-) Length   241 a.a.
NCBI ID   WP_014294008.1    Uniprot ID   A0A380K5K3
Organism   Streptococcus gallolyticus strain ICDDRB-NRC-S1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1586561..1597286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AU077_RS12100 (AU077_07915) - 1586598..1587665 (-) 1068 Protein_1618 glycosyltransferase -
  AU077_RS07920 (AU077_07920) - 1587625..1588696 (-) 1072 Protein_1619 sensor domain-containing diguanylate cyclase -
  AU077_RS07930 (AU077_07930) trmB 1589028..1589666 (-) 639 WP_014294011.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AU077_RS07935 (AU077_07935) ccrZ 1589666..1590460 (-) 795 WP_014294010.1 cell cycle regulator CcrZ -
  AU077_RS07940 (AU077_07940) - 1590525..1591559 (-) 1035 WP_014294009.1 ABC transporter permease -
  AU077_RS07945 (AU077_07945) pptA 1591561..1592286 (-) 726 WP_014294008.1 ABC transporter ATP-binding protein Regulator
  AU077_RS07950 (AU077_07950) - 1592350..1592769 (+) 420 WP_039670484.1 HIT family protein -
  AU077_RS07955 (AU077_07955) - 1592766..1593068 (+) 303 WP_014294006.1 hypothetical protein -
  AU077_RS07960 (AU077_07960) brpA 1593151..1594293 (-) 1143 WP_014294005.1 biofilm formation/cell division transcriptional regulator BrpA -
  AU077_RS07965 (AU077_07965) - 1594304..1594816 (-) 513 WP_058621884.1 GNAT family N-acetyltransferase -
  AU077_RS07970 (AU077_07970) tsaE 1594809..1595252 (-) 444 WP_014294003.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AU077_RS07975 (AU077_07975) - 1595437..1596858 (-) 1422 WP_014294002.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26737.08 Da        Isoelectric Point: 4.4206

>NTDB_id=164063 AU077_RS07945 WP_014294008.1 1591561..1592286(-) (pptA) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
EMPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNAIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=164063 AU077_RS07945 WP_014294008.1 1591561..1592286(-) (pptA) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATCCCA
GAAATGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTTAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTGGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGCAATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380K5K3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.498

99.17

0.788
  pptA Streptococcus thermophilus LMD-9

79.079

99.17

0.784

Multiple sequence alignment