Detailed information NTG0163562

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AT706_RS18545
• Genome accession: NZ_CP013654
• Coordinates: 3609269..3610381 (-)
• Length: 370 a.a.
• NCBI ID: WP_015382541.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain BSD-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3604269..3615381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AT706_RS18530 (AT706_18530)	gyrA	3604359..3606824 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
AT706_RS18535 (AT706_18535)	gyrB	3607035..3608951 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AT706_RS18540 (AT706_18540)	remB	3609006..3609251 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
AT706_RS18545 (AT706_18545)	recF	3609269..3610381 (-)	1113	WP_015382541.1	DNA replication/repair protein RecF	Machinery gene
AT706_RS18550 (AT706_18550)	rlbA	3610397..3610612 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
AT706_RS18555 (AT706_18555)	dnaN	3610743..3611879 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
AT706_RS18560 (AT706_18560)	dnaA	3612066..3613406 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
AT706_RS18565 (AT706_18565)	rpmH	3614033..3614167 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AT706_RS18570 (AT706_18570)	rnpA	3614319..3614669 (+)	351	WP_003242628.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42320.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=163562 AT706_RS18545 WP_015382541.1 3609269..3610381(-) (recF) [Bacillus subtilis subsp. subtilis strain BSD-2]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGS
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=163562 AT706_RS18545 WP_015382541.1 3609269..3610381(-) (recF) [Bacillus subtilis subsp. subtilis strain BSD-2]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCTCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGTCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCCCGTCTACCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTTTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.73	100	0.997