Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AT706_RS18320 | Genome accession | NZ_CP013654 |
| Coordinates | 3568821..3569111 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain BSD-2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3563821..3574111
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT706_RS18305 (AT706_18310) | yabE | 3564016..3565329 (-) | 1314 | WP_015382562.1 | ubiquitin-like domain-containing protein | - |
| AT706_RS18310 (AT706_18315) | dayD | 3565485..3566252 (-) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| AT706_RS18315 (AT706_18320) | metG | 3566332..3568326 (-) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| AT706_RS18320 (AT706_18325) | abrB | 3568821..3569111 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AT706_RS18325 (AT706_18330) | rsmI | 3569160..3570038 (-) | 879 | WP_041517603.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AT706_RS18330 (AT706_18335) | yazA | 3570013..3570312 (-) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| AT706_RS18335 (AT706_18340) | trmNF | 3570299..3571042 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AT706_RS18340 (AT706_18345) | yabA | 3571101..3571460 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AT706_RS18345 (AT706_18350) | ricT | 3571475..3572302 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| AT706_RS18350 (AT706_18355) | holB | 3572305..3573294 (-) | 990 | WP_015482689.1 | DNA polymerase III subunit delta' | - |
| AT706_RS18355 (AT706_18360) | yaaR | 3573306..3573746 (-) | 441 | WP_015382556.1 | YaaR family protein | - |
| AT706_RS18360 (AT706_18365) | darA | 3573759..3574088 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=163560 AT706_RS18320 WP_003226760.1 3568821..3569111(+) (abrB) [Bacillus subtilis subsp. subtilis strain BSD-2]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=163560 AT706_RS18320 WP_003226760.1 3568821..3569111(+) (abrB) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |