Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AT706_RS14005 Genome accession   NZ_CP013654
Coordinates   2717903..2718694 (-) Length   263 a.a.
NCBI ID   WP_015383146.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSD-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 2712903..2723694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT706_RS13965 (AT706_13970) ephM 2713739..2714599 (-) 861 WP_015383151.1 epoxide hydrolase EphM -
  AT706_RS13970 (AT706_13975) spdL 2714586..2714918 (-) 333 WP_041517766.1 SdpC immunity protein SpdL -
  AT706_RS13975 (AT706_13980) yfhK 2715003..2715521 (-) 519 WP_015252515.1 SH3 domain-containing protein -
  AT706_RS13980 (AT706_13985) yfhJ 2715666..2715935 (-) 270 WP_003243789.1 YfhJ family protein -
  AT706_RS13985 (AT706_13990) sspK 2716060..2716212 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AT706_RS13990 (AT706_13995) yfhI 2716244..2717437 (-) 1194 WP_015482975.1 MFS transporter -
  AT706_RS14000 (AT706_14005) yfhH 2717580..2717894 (-) 315 WP_015383147.1 YfhH family protein -
  AT706_RS14005 (AT706_14010) recX 2717903..2718694 (-) 792 WP_015383146.1 recombination regulator RecX Regulator
  AT706_RS14010 (AT706_14015) yfhF 2718783..2719694 (+) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  AT706_RS14015 (AT706_14020) yfhE 2719749..2719859 (+) 111 WP_003223230.1 YfhE family protein -
  AT706_RS14020 (AT706_14025) yfhD 2719926..2720117 (+) 192 WP_003233561.1 YfhD family protein -
  AT706_RS14025 (AT706_14030) yfhC 2720156..2720740 (-) 585 WP_015482973.1 nitroreductase family protein -
  AT706_RS14030 (AT706_14035) yfhB 2720828..2721709 (-) 882 WP_015383143.1 PhzF family phenazine biosynthesis isomerase -
  AT706_RS14035 (AT706_14040) sxzA 2721824..2722855 (-) 1032 WP_003243057.1 FecCD family ABC transporter permease -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30898.10 Da        Isoelectric Point: 6.6690

>NTDB_id=163550 AT706_RS14005 WP_015383146.1 2717903..2718694(-) (recX) [Bacillus subtilis subsp. subtilis strain BSD-2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EEHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=163550 AT706_RS14005 WP_015383146.1 2717903..2718694(-) (recX) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGAGCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGGGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.24

100

0.992


Multiple sequence alignment