Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AT706_RS10895 Genome accession   NZ_CP013654
Coordinates   2155741..2156316 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSD-2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2150741..2161316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT706_RS10870 (AT706_10875) mobB 2151137..2151658 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AT706_RS10875 (AT706_10880) glp 2151619..2152911 (-) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  AT706_RS10880 (AT706_10885) moeB 2152929..2153948 (-) 1020 WP_015383546.1 molybdopterin-synthase adenylyltransferase MoeB -
  AT706_RS10885 (AT706_10890) mobA 2153999..2154598 (-) 600 WP_015383545.1 molybdenum cofactor guanylyltransferase -
  AT706_RS10890 (AT706_10895) cse15 2154735..2155700 (+) 966 WP_015383544.1 spore protein Cse15 -
  AT706_RS10895 (AT706_10900) rok 2155741..2156316 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AT706_RS10900 (AT706_10905) ykuV 2156782..2157228 (-) 447 WP_015483177.1 thiol-disulfide oxidoreductase YkuV -
  AT706_RS10905 (AT706_10910) ahpA 2157298..2157840 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AT706_RS10910 (AT706_10915) mscT 2158077..2158880 (+) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  AT706_RS10915 (AT706_10920) ykuS 2158917..2159162 (-) 246 WP_003232382.1 YkuS family protein -
  AT706_RS10920 (AT706_10925) dapI 2159224..2160348 (-) 1125 WP_015383541.1 N-acetyldiaminopimelate deacetylase -
  AT706_RS10925 (AT706_10930) dapD 2160418..2161128 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=163532 AT706_RS10895 WP_003232378.1 2155741..2156316(-) (rok) [Bacillus subtilis subsp. subtilis strain BSD-2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=163532 AT706_RS10895 WP_003232378.1 2155741..2156316(-) (rok) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment