Detailed information NTG0163514

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AT706_RS05930
• Genome accession: NZ_CP013654
• Coordinates: 1153909..1156239 (+)
• Length: 776 a.a.
• NCBI ID: WP_041517945.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain BSD-2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1148909..1161239

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AT706_RS05890 (AT706_05895)	yhbY	1149146..1149436 (+)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
AT706_RS05895 (AT706_05900)	nadD	1149448..1150017 (+)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
AT706_RS05900 (AT706_05905)	yqeK	1150007..1150567 (+)	561	WP_015483448.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AT706_RS05905 (AT706_05910)	rsfS	1150585..1150941 (+)	357	WP_014480315.1	ribosome silencing factor	-
AT706_RS05910 (AT706_05915)	yqeM	1150938..1151681 (+)	744	WP_015384134.1	class I SAM-dependent DNA methyltransferase	-
AT706_RS05915 (AT706_05920)	comER	1151747..1152568 (-)	822	WP_004398597.1	late competence protein ComER	-
AT706_RS05920 (AT706_05925)	comEA	1152652..1153269 (+)	618	WP_015384132.1	competence protein ComEA	Machinery gene
AT706_RS05925 (AT706_05930)	comEB	1153336..1153905 (+)	570	WP_003229978.1	ComE operon protein 2	-
AT706_RS05930 (AT706_05935)	comEC	1153909..1156239 (+)	2331	WP_041517945.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AT706_RS05935 (AT706_05940)	yqzM	1156279..1156413 (-)	135	WP_003229983.1	YqzM family protein	-
AT706_RS21250	-	1156454..1156603 (+)	150	WP_003229985.1	hypothetical protein	-
AT706_RS05940 (AT706_05945)	holA	1156643..1157686 (+)	1044	WP_015384130.1	DNA polymerase III subunit delta	-
AT706_RS05945 (AT706_05950)	rpsT	1157701..1157967 (-)	267	WP_003229989.1	30S ribosomal protein S20	-
AT706_RS05950 (AT706_05955)	gpr	1158171..1159277 (+)	1107	WP_014480309.1	GPR endopeptidase	-
AT706_RS05955 (AT706_05960)	spoIIP	1159340..1160545 (+)	1206	WP_015384129.1	spore autolysin SpoIIP	-
AT706_RS05960 (AT706_05965)	yqxA	1160562..1160900 (+)	339	WP_014477382.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86647.97 Da
• Isoelectric Point: 6.8607

>NTDB_id=163514 AT706_RS05930 WP_041517945.1 1153909..1156239(+) (comEC) [Bacillus subtilis subsp. subtilis strain BSD-2]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDNIPKIDGDRMSMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAASSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHKFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVTILLLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKYHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFTQQLQPETAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRGGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=163514 AT706_RS05930 WP_041517945.1 1153909..1156239(+) (comEC) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGCGTAATTCGCGATTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACTTATCAATTC
AAGGCAGTGATTGACAATATTCCTAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTCAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAAGATGAAGTGCTTACTGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGGCTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATACGCCTTGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTTCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATAAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCTGATGTTGATGTATTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCCTCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACTGGAGGC
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGTATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCACCCAACAGCTTCAGCCGGAAACGGCCATTATCTCAGCTGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGGTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.809	100	0.978