Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AT706_RS05835 | Genome accession | NZ_CP013654 |
| Coordinates | 1140985..1141395 (+) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis strain BSD-2 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1135985..1146395
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT706_RS05810 (AT706_05815) | yrkP | 1136683..1137378 (+) | 696 | WP_015384143.1 | two-component response regulator YrkP | - |
| AT706_RS05815 (AT706_05820) | yrkQ | 1137365..1138663 (+) | 1299 | WP_015483453.1 | two-component system sensor histidine kinase YrkQ | - |
| AT706_RS05820 (AT706_05825) | psiE | 1138709..1139125 (+) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| AT706_RS20825 | - | 1139666..1139830 (+) | 165 | WP_015483452.1 | hypothetical protein | - |
| AT706_RS20830 | - | 1139788..1139979 (+) | 192 | Protein_1148 | recombinase family protein | - |
| AT706_RS05830 (AT706_05835) | sigK | 1140061..1140789 (-) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| AT706_RS05835 (AT706_05840) | nucA/comI | 1140985..1141395 (+) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| AT706_RS05840 (AT706_05845) | yqeB | 1141428..1142150 (-) | 723 | WP_015384139.1 | hypothetical protein | - |
| AT706_RS05845 (AT706_05850) | gnd | 1142402..1143295 (+) | 894 | WP_015384138.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| AT706_RS05850 (AT706_05855) | yqeD | 1143314..1143940 (-) | 627 | WP_015384137.1 | TVP38/TMEM64 family protein | - |
| AT706_RS05855 (AT706_05860) | cwlH | 1144127..1144879 (+) | 753 | WP_015483449.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| AT706_RS05860 (AT706_05865) | yqeF | 1145131..1145862 (+) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| AT706_RS05870 (AT706_05875) | - | 1146168..1146308 (-) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=163511 AT706_RS05835 WP_009967785.1 1140985..1141395(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain BSD-2]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=163511 AT706_RS05835 WP_009967785.1 1140985..1141395(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |