Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ATM98_RS06355 | Genome accession | NZ_CP013651 |
| Coordinates | 1315313..1317742 (-) | Length | 809 a.a. |
| NCBI ID | WP_048690751.1 | Uniprot ID | - |
| Organism | Streptococcus sp. A12 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1310313..1322742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATM98_RS06325 (ATM98_06325) | - | 1310677..1311474 (-) | 798 | WP_048690738.1 | NUDIX domain-containing protein | - |
| ATM98_RS06330 (ATM98_06330) | pnuC | 1311475..1312257 (-) | 783 | WP_061564463.1 | nicotinamide riboside transporter PnuC | - |
| ATM98_RS06335 (ATM98_06335) | - | 1312270..1313328 (-) | 1059 | WP_048690743.1 | AAA family ATPase | - |
| ATM98_RS09755 | - | 1313531..1313824 (-) | 294 | WP_237367522.1 | hypothetical protein | - |
| ATM98_RS09760 | - | 1313790..1314266 (-) | 477 | WP_237367523.1 | hypothetical protein | - |
| ATM98_RS06345 (ATM98_06345) | - | 1314428..1314832 (-) | 405 | WP_061564464.1 | DUF4430 domain-containing protein | - |
| ATM98_RS06350 (ATM98_06350) | - | 1314813..1315301 (-) | 489 | WP_061564465.1 | hypothetical protein | - |
| ATM98_RS06355 (ATM98_06355) | clpC | 1315313..1317742 (-) | 2430 | WP_048690751.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ATM98_RS06360 (ATM98_06360) | - | 1317750..1318208 (-) | 459 | WP_061564466.1 | CtsR family transcriptional regulator | - |
| ATM98_RS06365 (ATM98_06365) | - | 1318440..1322129 (-) | 3690 | WP_061564467.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89872.55 Da Isoelectric Point: 5.9065
>NTDB_id=163410 ATM98_RS06355 WP_048690751.1 1315313..1317742(-) (clpC) [Streptococcus sp. A12]
MNYSKALLETIEAAQILAGHFESQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMKRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEEGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRAQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDAAIET
AVVYANRYLTSRLLPDSAIDLLDEAAATVQNKGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKSYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGQLNFTID
MNYSKALLETIEAAQILAGHFESQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMKRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEEGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRAQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDAAIET
AVVYANRYLTSRLLPDSAIDLLDEAAATVQNKGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKSYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGQLNFTID
Nucleotide
Download Length: 2430 bp
>NTDB_id=163410 ATM98_RS06355 WP_048690751.1 1315313..1317742(-) (clpC) [Streptococcus sp. A12]
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTAGCGGGTCATTTTGAGTCTCAAACGCTAGA
TACCTGGCATATCCTAGTAGCCCTAGCCAATAATCCTTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGATGCGGCGGAGCACATTACGGGTCAAGTCTACCAACGGGATGGCCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTCGAAGAAATCATGAAACGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGAACAGAGCA
TGTCCTATTGGCACTTCTATTAGAACGGGGAACCTTGGCTTCTCAAGTATTGGAGTATGTCGGCTTCCGCTATGATGATC
AGGAAGAGGGCATTAAAATCGTCGAGCTTCGCAAGAGCTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTGAAAGCT
ATCCGTTCGCTCTATCGGGCCCAGCAACCCAATCGTCAAACCATGGGAAATATGATGGGCATGCCAGCCTCTACCAGCGG
TGGTTTGGAAGACTACACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGCCGGGGTCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACGAAAAATAACCCAGTCCTTGTCGGGGATGCCGGTGTCGGAAAG
ACCGCTCTAGCCTTGGGCTTGGCTCAACGGATTGCCAGCGGAGATGTCCCGACGGAGCTGGCTAAGATGCGGGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGGACGCGGTTCCGTGGAGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TCGAAGAAGATGGCCATGTCATCCTCTTCATTGATGAGCTCCATACCATTATGGGCTCTGGCTCTGGGATTGACTCCACC
TTGGATGCGGCCAATATCTTGAAGCCAGCCTTGGCTCGCGGGACCCTACGGACCGTAGGAGCCACTACGCAAGAAGAATA
CCAAAAACACATTGAAAAAGACGCCGCTCTGTCACGCCGCTTTGCTAAAGTCTTGATTGAGCAACCCTCTGTTGCAGATA
GCATTGCGATTTTGCAAGGGCTCAAGAAGACCTATGAACGTCACCACCGTGTCCATATTACGGATGCGGCTATTGAGACA
GCTGTTGTCTATGCCAATCGTTATTTGACCAGCCGCCTCTTGCCTGACTCCGCCATTGACCTCTTGGATGAGGCGGCAGC
GACCGTGCAAAACAAGGGGCCTCAAGCCGGTCTTCAGTCCGACTTGACAGCTGCCGATCAAGCCTTGCTCAAGGGGCAGT
GGAAAAAAGTTGCTCAGTTGCTAAAAGAAGATGCTAGTCCAAAAGGCTACCAGCTAGAAGTTAAGGAAGAGGATATCCTG
AAGACGCTTAGTCAATTGTCAGGCATTCCTGTGGAGAAACTAACCCAAACAGCAGCTAAGAAATACCTTGAATTGGAAGC
AGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCTGTCTCAAGTATCAGCCGAGCGATTCGTCGCAATCAGTCGGGAA
TTCGTTCTCACAAACGGCCAATTGGCTCCTTCCTCTTCCTCGGTCCCACTGGGGTCGGGAAGACTGAGCTGGCGAAGGCG
CTGGCTGAAGTCCTCTTTGATGACGAGTCCGCTTTGATCCGCTTTGATATGAGTGAATACATGGAGAAATTTGCGGCCAG
TCGTCTCAACGGTGCCCCTCCAGGTTATGTTGGTTATGAAGAAGGGGGCGAGTTGACGGAAAAAGTCCGCAACAAATCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCAGATATCTTTAACGTTCTCTTGCAAGTCTTGGATGACGGT
GTCTTGACCGACAGCAAGGGACGCAAGGTAGATTTCTCCAATACCATTATTATCATGACCTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACAGTTGGCTTTGGAGCCAAGGATATTCGCTTTGACCAAGCCAATATGGAGAAACGCATCTTCG
AAGAGTTGAAGAAGACTTATCGACCAGAGTTTATCAACCGGATTGATGAGAAGGTTGTCTTCCATAGCTTGACCAGTGAT
CAAATGCATGAGATTGTCAAGATTATGGTGAAACCATTGGTTCAATCTCTAGCAGAGAAAGGCATTACTCTGAAATTCCA
AGCGTCTGCCCTTAAATGGCTGGCGACTCACGGATATGATCCAGAGATGGGAGCACGTCCTTTGCGCCGGACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACCCTCAAGGTAGGTGTCAAG
TCTGGTCAGCTTAACTTCACGATTGACTAG
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTAGCGGGTCATTTTGAGTCTCAAACGCTAGA
TACCTGGCATATCCTAGTAGCCCTAGCCAATAATCCTTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGATGCGGCGGAGCACATTACGGGTCAAGTCTACCAACGGGATGGCCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTCGAAGAAATCATGAAACGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGAACAGAGCA
TGTCCTATTGGCACTTCTATTAGAACGGGGAACCTTGGCTTCTCAAGTATTGGAGTATGTCGGCTTCCGCTATGATGATC
AGGAAGAGGGCATTAAAATCGTCGAGCTTCGCAAGAGCTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTGAAAGCT
ATCCGTTCGCTCTATCGGGCCCAGCAACCCAATCGTCAAACCATGGGAAATATGATGGGCATGCCAGCCTCTACCAGCGG
TGGTTTGGAAGACTACACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGCCGGGGTCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACGAAAAATAACCCAGTCCTTGTCGGGGATGCCGGTGTCGGAAAG
ACCGCTCTAGCCTTGGGCTTGGCTCAACGGATTGCCAGCGGAGATGTCCCGACGGAGCTGGCTAAGATGCGGGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGGACGCGGTTCCGTGGAGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TCGAAGAAGATGGCCATGTCATCCTCTTCATTGATGAGCTCCATACCATTATGGGCTCTGGCTCTGGGATTGACTCCACC
TTGGATGCGGCCAATATCTTGAAGCCAGCCTTGGCTCGCGGGACCCTACGGACCGTAGGAGCCACTACGCAAGAAGAATA
CCAAAAACACATTGAAAAAGACGCCGCTCTGTCACGCCGCTTTGCTAAAGTCTTGATTGAGCAACCCTCTGTTGCAGATA
GCATTGCGATTTTGCAAGGGCTCAAGAAGACCTATGAACGTCACCACCGTGTCCATATTACGGATGCGGCTATTGAGACA
GCTGTTGTCTATGCCAATCGTTATTTGACCAGCCGCCTCTTGCCTGACTCCGCCATTGACCTCTTGGATGAGGCGGCAGC
GACCGTGCAAAACAAGGGGCCTCAAGCCGGTCTTCAGTCCGACTTGACAGCTGCCGATCAAGCCTTGCTCAAGGGGCAGT
GGAAAAAAGTTGCTCAGTTGCTAAAAGAAGATGCTAGTCCAAAAGGCTACCAGCTAGAAGTTAAGGAAGAGGATATCCTG
AAGACGCTTAGTCAATTGTCAGGCATTCCTGTGGAGAAACTAACCCAAACAGCAGCTAAGAAATACCTTGAATTGGAAGC
AGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCTGTCTCAAGTATCAGCCGAGCGATTCGTCGCAATCAGTCGGGAA
TTCGTTCTCACAAACGGCCAATTGGCTCCTTCCTCTTCCTCGGTCCCACTGGGGTCGGGAAGACTGAGCTGGCGAAGGCG
CTGGCTGAAGTCCTCTTTGATGACGAGTCCGCTTTGATCCGCTTTGATATGAGTGAATACATGGAGAAATTTGCGGCCAG
TCGTCTCAACGGTGCCCCTCCAGGTTATGTTGGTTATGAAGAAGGGGGCGAGTTGACGGAAAAAGTCCGCAACAAATCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCAGATATCTTTAACGTTCTCTTGCAAGTCTTGGATGACGGT
GTCTTGACCGACAGCAAGGGACGCAAGGTAGATTTCTCCAATACCATTATTATCATGACCTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACAGTTGGCTTTGGAGCCAAGGATATTCGCTTTGACCAAGCCAATATGGAGAAACGCATCTTCG
AAGAGTTGAAGAAGACTTATCGACCAGAGTTTATCAACCGGATTGATGAGAAGGTTGTCTTCCATAGCTTGACCAGTGAT
CAAATGCATGAGATTGTCAAGATTATGGTGAAACCATTGGTTCAATCTCTAGCAGAGAAAGGCATTACTCTGAAATTCCA
AGCGTCTGCCCTTAAATGGCTGGCGACTCACGGATATGATCCAGAGATGGGAGCACGTCCTTTGCGCCGGACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACCCTCAAGGTAGGTGTCAAG
TCTGGTCAGCTTAACTTCACGATTGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
76.514 |
100 |
0.765 |
| clpC | Streptococcus pneumoniae D39 |
76.514 |
100 |
0.765 |
| clpC | Streptococcus pneumoniae TIGR4 |
76.514 |
100 |
0.765 |
| clpC | Streptococcus mutans UA159 |
66.422 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.994 |
100 |
0.656 |
| clpC | Streptococcus thermophilus LMD-9 |
64.994 |
100 |
0.656 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.678 |
100 |
0.501 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.432 |
100 |
0.455 |
| clpE | Streptococcus mutans UA159 |
48.636 |
77.009 |
0.375 |
| clpE | Streptococcus pneumoniae Rx1 |
47.352 |
77.009 |
0.365 |
| clpE | Streptococcus pneumoniae D39 |
47.352 |
77.009 |
0.365 |
| clpE | Streptococcus pneumoniae R6 |
47.352 |
77.009 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.352 |
77.009 |
0.365 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.794 |
79.357 |
0.363 |