Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A6L42_RS05365 | Genome accession | NZ_CP016671 |
| Coordinates | 1011532..1014111 (+) | Length | 859 a.a. |
| NCBI ID | WP_002235021.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain M22783 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1006532..1019111
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6L42_RS05345 (A6L42_05345) | ppx | 1007290..1008798 (+) | 1509 | WP_002258642.1 | exopolyphosphatase | - |
| A6L42_RS05350 (A6L42_05350) | - | 1009007..1009330 (-) | 324 | WP_002225099.1 | Ag473 family lipoprotein | - |
| A6L42_RS05355 (A6L42_05355) | - | 1009649..1010194 (-) | 546 | WP_002235019.1 | hypothetical protein | - |
| A6L42_RS05360 (A6L42_05360) | trpS | 1010262..1011272 (-) | 1011 | WP_002235020.1 | tryptophan--tRNA ligase | - |
| A6L42_RS05365 (A6L42_05365) | clpC | 1011532..1014111 (+) | 2580 | WP_002235021.1 | ATP-dependent chaperone ClpB | Regulator |
| A6L42_RS05370 (A6L42_05370) | - | 1014198..1015412 (-) | 1215 | WP_002220612.1 | pyridoxal phosphate-dependent aminotransferase | - |
| A6L42_RS05375 (A6L42_05375) | - | 1015501..1015710 (-) | 210 | WP_002212949.1 | tautomerase family protein | - |
| A6L42_RS05380 (A6L42_05380) | - | 1016055..1016861 (+) | 807 | WP_002212946.1 | DUF4198 domain-containing protein | - |
| A6L42_RS05385 (A6L42_05385) | - | 1016919..1018184 (-) | 1266 | WP_002257138.1 | Glu/Leu/Phe/Val family dehydrogenase | - |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95158.61 Da Isoelectric Point: 5.3090
>NTDB_id=162897 A6L42_RS05365 WP_002235021.1 1011532..1014111(+) (clpC) [Neisseria meningitidis strain M22783]
MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHSGVNVPQVKQRLQQHLSSLPKVSGQGGD
IMPSRELQAVLNLMDKAATKRGDVYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
VKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQID
EVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGER
DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE
YMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVM
TSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD
AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA
MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHSGVNVPQVKQRLQQHLSSLPKVSGQGGD
IMPSRELQAVLNLMDKAATKRGDVYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
VKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQID
EVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGER
DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE
YMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVM
TSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD
AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA
Nucleotide
Download Length: 2580 bp
>NTDB_id=162897 A6L42_RS05365 WP_002235021.1 1011532..1014111(+) (clpC) [Neisseria meningitidis strain M22783]
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGCTGCGGACGGCAG
CTATCTGGAAGCAGGCTTTGTGTTAAAAGCCCTGCTTGACGACCAAAACAGCGGTGCCGCCGCGTTGCTGGCGCATTCGG
GCGTGAACGTGCCGCAGGTGAAACAGCGTTTGCAGCAGCATTTGAGCAGCCTGCCGAAAGTGTCCGGCCAGGGCGGCGAT
ATTATGCCTAGCCGTGAGCTGCAAGCTGTATTGAACTTGATGGACAAAGCCGCAACCAAGCGCGGCGATGTCTATATCGC
CAGCGAACTTTTCCTGCTTGCCTTGGTGCAGCAGAACGATGCAACCGGCAAAATTTTGAAAGAAGCCGGTGCGACCGAAC
AAAACATTAATGCCGCGATTGATGCGGTACGAGGAGGACAAAACGTGAATGATGCGAATGCCGAAGACCAACGCGATGCT
TTGAAAAAATACACACTTGATCTGACCCAGCGCGCCCGCGACGGCAAACTTGACCCCGTTATCGGCCGTGATGATGAAAT
CCGCCGCGCGATTCAGGTATTGCAACGCCGTACCAAAAACAACCCCGTGCTGATTGGTGAGCCGGGTGTGGGTAAAACCG
CTATTGTTGAAGGCTTGGCGCAACGTATCGTCAACGGCGAAGTGCCTGAATCCCTGCGCAACAAACGCCTGCTGGTTCTG
GACTTGGCGGCTTTGATTGCCGGCGCGAAATATCGCGGCGAATTTGAAGAACGCTTGAAAGGCGTGTTGAACGACTTGGC
GAAAGACGATGGCAACACTCTGATTTTCATCGACGAAATTCATACCTTGGTTGGCGCAGGTAAAACCGACGGCGCGATGG
ACGCGGGCAATATGTTGAAACCGGCTTTGGCACGCGGCGAACTGCACTGTATCGGTGCGACCACCTTGGACGAATACCGC
CAATACATCGAAAAAGACGCGGCACTCGAACGCCGTTTCCAAAAAGTATTGGTTGGCGAGCCCAGCGTGGAAGACACCAT
CGCCATCTTGCGCGGTTTGCAGGAGCGTTATGAAATCCACCACGGTATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATCACCGACCGCTTCCTGCCCGATAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGT
GTCAAGATGGAAAAAGAAACCAAGCCGGAAGCAATGGACAAAATCGACCGCCGTCTAATTCAGCTTCGGATGGAAAAGGC
GCACGTTGAAAAAGAAAAAGACGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAGGAAATCAACGGTCTGCAAAAAG
AATACGCCGATTTAGACGAAATCTGGAAAGCCGAAAAAGCAATTTCAGACGGTGCTGCTAATATTAAGAAACAAATTGAC
GAAGTCAAAATTAAAATCGAACAGGCAAAACGGCAAGGCGATTTGGCACTGGCTTCAAAATTGATGTATGAAGATTTGGA
GCATTTGGAAAAACAGCGTGCAGCCGCCGAACGGGCAGATACGGACAGCACAAAACCGGCAAACAAACTCTTGCGTAATA
ATGTCGGCGCAGAGGAAATCGCAGAGGTGGTTTCCCGTATGACCGGCATTCCCGTATCCAAAATGATGGAAGGCGAACGC
GACAAACTGCTGAAAATGGAAGAAGTATTGCACCGCCGCGTGGTCGGACAGGACGAAGCCGTGCGTGCCGTGTCCGACGC
TATCCGCCGCAGCCGCTCCGGTCTTGCCGATCCGAACAAGCCTTACGGCAGCTTCCTGTTCTTGGGCCCGACCGGCGTGG
GTAAAACCGAGTTGTGTAAAGCCCTGGCAGGCTTTCTGTTCGACAGCGAAGATCATCTGATTCGCATCGATATGTCCGAA
TATATGGAAAAACACGCCGTTGCACGCCTGATCGGTGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGAC
CGAACAAGTGCGCCGCAAACCGTACAGCGTGATTCTGCTGGACGAAGTGGAAAAAGCCCATCCCGATGTGTTCAACATCC
TGCTGCAAGTATTGGATGACGGTCGTTTGACCGACGGGCAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATG
ACTTCCAACATCGGCAGCCAGCACATCCAACAAATGGGCATTCAGGATTACGAAGCGGTAAAAGAAGTTGTGATGGAGGA
TGTGAAAGAACATTTCCGTCCTGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCACGGTTTGGATCAGGCAAACA
TCCGCAGCATTGCGAAAATCCAGCTCAAAGGTTTGGAAAAACGTTTGGAAAAACAAAACCTGCGCCTGACTGTTTCCGAT
GCCGCACTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCCATCCAGTCGGA
AATCGAAAACCCGCTGGCAAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAGGGTAGAAGCCGACGGCG
ACAGACTGAAATTTGCCTGA
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGCTGCGGACGGCAG
CTATCTGGAAGCAGGCTTTGTGTTAAAAGCCCTGCTTGACGACCAAAACAGCGGTGCCGCCGCGTTGCTGGCGCATTCGG
GCGTGAACGTGCCGCAGGTGAAACAGCGTTTGCAGCAGCATTTGAGCAGCCTGCCGAAAGTGTCCGGCCAGGGCGGCGAT
ATTATGCCTAGCCGTGAGCTGCAAGCTGTATTGAACTTGATGGACAAAGCCGCAACCAAGCGCGGCGATGTCTATATCGC
CAGCGAACTTTTCCTGCTTGCCTTGGTGCAGCAGAACGATGCAACCGGCAAAATTTTGAAAGAAGCCGGTGCGACCGAAC
AAAACATTAATGCCGCGATTGATGCGGTACGAGGAGGACAAAACGTGAATGATGCGAATGCCGAAGACCAACGCGATGCT
TTGAAAAAATACACACTTGATCTGACCCAGCGCGCCCGCGACGGCAAACTTGACCCCGTTATCGGCCGTGATGATGAAAT
CCGCCGCGCGATTCAGGTATTGCAACGCCGTACCAAAAACAACCCCGTGCTGATTGGTGAGCCGGGTGTGGGTAAAACCG
CTATTGTTGAAGGCTTGGCGCAACGTATCGTCAACGGCGAAGTGCCTGAATCCCTGCGCAACAAACGCCTGCTGGTTCTG
GACTTGGCGGCTTTGATTGCCGGCGCGAAATATCGCGGCGAATTTGAAGAACGCTTGAAAGGCGTGTTGAACGACTTGGC
GAAAGACGATGGCAACACTCTGATTTTCATCGACGAAATTCATACCTTGGTTGGCGCAGGTAAAACCGACGGCGCGATGG
ACGCGGGCAATATGTTGAAACCGGCTTTGGCACGCGGCGAACTGCACTGTATCGGTGCGACCACCTTGGACGAATACCGC
CAATACATCGAAAAAGACGCGGCACTCGAACGCCGTTTCCAAAAAGTATTGGTTGGCGAGCCCAGCGTGGAAGACACCAT
CGCCATCTTGCGCGGTTTGCAGGAGCGTTATGAAATCCACCACGGTATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATCACCGACCGCTTCCTGCCCGATAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGT
GTCAAGATGGAAAAAGAAACCAAGCCGGAAGCAATGGACAAAATCGACCGCCGTCTAATTCAGCTTCGGATGGAAAAGGC
GCACGTTGAAAAAGAAAAAGACGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAGGAAATCAACGGTCTGCAAAAAG
AATACGCCGATTTAGACGAAATCTGGAAAGCCGAAAAAGCAATTTCAGACGGTGCTGCTAATATTAAGAAACAAATTGAC
GAAGTCAAAATTAAAATCGAACAGGCAAAACGGCAAGGCGATTTGGCACTGGCTTCAAAATTGATGTATGAAGATTTGGA
GCATTTGGAAAAACAGCGTGCAGCCGCCGAACGGGCAGATACGGACAGCACAAAACCGGCAAACAAACTCTTGCGTAATA
ATGTCGGCGCAGAGGAAATCGCAGAGGTGGTTTCCCGTATGACCGGCATTCCCGTATCCAAAATGATGGAAGGCGAACGC
GACAAACTGCTGAAAATGGAAGAAGTATTGCACCGCCGCGTGGTCGGACAGGACGAAGCCGTGCGTGCCGTGTCCGACGC
TATCCGCCGCAGCCGCTCCGGTCTTGCCGATCCGAACAAGCCTTACGGCAGCTTCCTGTTCTTGGGCCCGACCGGCGTGG
GTAAAACCGAGTTGTGTAAAGCCCTGGCAGGCTTTCTGTTCGACAGCGAAGATCATCTGATTCGCATCGATATGTCCGAA
TATATGGAAAAACACGCCGTTGCACGCCTGATCGGTGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGAC
CGAACAAGTGCGCCGCAAACCGTACAGCGTGATTCTGCTGGACGAAGTGGAAAAAGCCCATCCCGATGTGTTCAACATCC
TGCTGCAAGTATTGGATGACGGTCGTTTGACCGACGGGCAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATG
ACTTCCAACATCGGCAGCCAGCACATCCAACAAATGGGCATTCAGGATTACGAAGCGGTAAAAGAAGTTGTGATGGAGGA
TGTGAAAGAACATTTCCGTCCTGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCACGGTTTGGATCAGGCAAACA
TCCGCAGCATTGCGAAAATCCAGCTCAAAGGTTTGGAAAAACGTTTGGAAAAACAAAACCTGCGCCTGACTGTTTCCGAT
GCCGCACTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCCATCCAGTCGGA
AATCGAAAACCCGCTGGCAAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAGGGTAGAAGCCGACGGCG
ACAGACTGAAATTTGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.786 |
100 |
0.439 |
| clpC | Streptococcus pneumoniae TIGR4 |
38.87 |
100 |
0.409 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
38.685 |
100 |
0.404 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.118 |
80.792 |
0.381 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.206 |
79.162 |
0.374 |
| clpC | Streptococcus pneumoniae Rx1 |
44.35 |
82.421 |
0.366 |
| clpC | Streptococcus pneumoniae D39 |
44.35 |
82.421 |
0.366 |