Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | ASZ85_RS02865 | Genome accession | NZ_CP013317 |
| Coordinates | 572984..573502 (+) | Length | 172 a.a. |
| NCBI ID | WP_001130227.1 | Uniprot ID | - |
| Organism | Vibrio cholerae strain NCTC5395 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 567984..578502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASZ85_RS02855 (ASZ85_00566) | - | 568394..571249 (+) | 2856 | WP_071919605.1 | M16 family metallopeptidase | - |
| ASZ85_RS02860 (ASZ85_00567) | gshA | 571361..572935 (+) | 1575 | WP_000032608.1 | glutamate--cysteine ligase | - |
| ASZ85_RS02865 (ASZ85_00568) | luxS | 572984..573502 (+) | 519 | WP_001130227.1 | S-ribosylhomocysteine lyase | Regulator |
| ASZ85_RS02870 (ASZ85_00569) | - | 573572..574852 (-) | 1281 | WP_000340990.1 | HlyC/CorC family transporter | - |
| ASZ85_RS02875 (ASZ85_00570) | - | 574935..575729 (-) | 795 | WP_000369278.1 | cytochrome C assembly family protein | - |
| ASZ85_RS02880 (ASZ85_00571) | ffh | 575942..577327 (+) | 1386 | WP_000462721.1 | signal recognition particle protein | - |
| ASZ85_RS02885 (ASZ85_00572) | rpsP | 577563..577811 (+) | 249 | WP_000256449.1 | 30S ribosomal protein S16 | - |
| ASZ85_RS02890 (ASZ85_00573) | rimM | 577839..578393 (+) | 555 | WP_000061906.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19080.90 Da Isoelectric Point: 5.2199
>NTDB_id=161999 ASZ85_RS02865 WP_001130227.1 572984..573502(+) (luxS) [Vibrio cholerae strain NCTC5395]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
Nucleotide
Download Length: 519 bp
>NTDB_id=161999 ASZ85_RS02865 WP_001130227.1 572984..573502(+) (luxS) [Vibrio cholerae strain NCTC5395]
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
100 |
100 |
1 |