Detailed information NTG0161932

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ASZ79_RS13575
• Genome accession: NZ_CP013313
• Coordinates: 2844594..2845601 (-)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain E9120
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2839594..2850601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASZ79_RS13550 (ASZ79_02658)	rraA	2840169..2840684 (-)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-
ASZ79_RS13555 (ASZ79_02659)	-	2840759..2841676 (-)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ASZ79_RS13560 (ASZ79_02660)	hslU	2841780..2843111 (-)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
ASZ79_RS13565 (ASZ79_02661)	hslV	2843177..2843734 (-)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
ASZ79_RS13570 (ASZ79_02662)	-	2843871..2844422 (-)	552	WP_001884022.1	SPOR domain-containing protein	-
ASZ79_RS13575 (ASZ79_02664)	cytR	2844594..2845601 (-)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
ASZ79_RS13580 (ASZ79_02665)	priA	2845907..2848111 (-)	2205	WP_001247858.1	primosomal protein N'	-
ASZ79_RS13585	rpmE	2848366..2848584 (+)	219	WP_000643446.1	50S ribosomal protein L31	-
ASZ79_RS13590 (ASZ79_02668)	-	2848892..2850169 (+)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
ASZ79_RS13595 (ASZ79_02669)	metJ	2850280..2850597 (-)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=161932 ASZ79_RS13575 WP_000224452.1 2844594..2845601(-) (cytR) [Vibrio cholerae strain E9120]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=161932 ASZ79_RS13575 WP_000224452.1 2844594..2845601(-) (cytR) [Vibrio cholerae strain E9120]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904