Detailed information NTG0161824

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ASZ87_RS09750
• Genome accession: NZ_CP013309
• Coordinates: 2058723..2059730 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain E1162
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2053723..2064730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASZ87_RS09730 (ASZ87_01865)	metJ	2053727..2054044 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
ASZ87_RS09735 (ASZ87_01866)	-	2054155..2055432 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
ASZ87_RS09740 (ASZ87_01867)	rpmE	2055740..2055958 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
ASZ87_RS09745 (ASZ87_01868)	priA	2056213..2058417 (+)	2205	WP_001247858.1	primosomal protein N'	-
ASZ87_RS09750 (ASZ87_01869)	cytR	2058723..2059730 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
ASZ87_RS09755 (ASZ87_01870)	-	2059902..2060453 (+)	552	WP_001884022.1	SPOR domain-containing protein	-
ASZ87_RS09760 (ASZ87_01871)	hslV	2060590..2061147 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
ASZ87_RS09765 (ASZ87_01872)	hslU	2061213..2062544 (+)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
ASZ87_RS09770 (ASZ87_01873)	-	2062648..2063565 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ASZ87_RS09775 (ASZ87_01874)	rraA	2063640..2064155 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=161824 ASZ87_RS09750 WP_000224452.1 2058723..2059730(+) (cytR) [Vibrio cholerae strain E1162]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=161824 ASZ87_RS09750 WP_000224452.1 2058723..2059730(+) (cytR) [Vibrio cholerae strain E1162]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904