Detailed information NTG0161743

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ASZ81_RS13665
• Genome accession: NZ_CP013305
• Coordinates: 2881919..2882926 (-)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain CRC1106
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2876919..2887926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASZ81_RS13640 (ASZ81_02684)	rraA	2877494..2878009 (-)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-
ASZ81_RS13645 (ASZ81_02685)	-	2878084..2879001 (-)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ASZ81_RS13650 (ASZ81_02686)	hslU	2879105..2880436 (-)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
ASZ81_RS13655 (ASZ81_02687)	hslV	2880502..2881059 (-)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
ASZ81_RS13660	-	2881196..2881747 (-)	552	WP_001884022.1	SPOR domain-containing protein	-
ASZ81_RS13665 (ASZ81_02690)	cytR	2881919..2882926 (-)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
ASZ81_RS13670 (ASZ81_02691)	priA	2883231..2885435 (-)	2205	WP_001247858.1	primosomal protein N'	-
ASZ81_RS13675	rpmE	2885690..2885908 (+)	219	WP_000643446.1	50S ribosomal protein L31	-
ASZ81_RS13680 (ASZ81_02694)	-	2886216..2887493 (+)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
ASZ81_RS13685 (ASZ81_02695)	metJ	2887604..2887921 (-)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=161743 ASZ81_RS13665 WP_000224452.1 2881919..2882926(-) (cytR) [Vibrio cholerae strain CRC1106]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=161743 ASZ81_RS13665 WP_000224452.1 2881919..2882926(-) (cytR) [Vibrio cholerae strain CRC1106]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904