Detailed information NTG0161695

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ASZ82_RS13665
• Genome accession: NZ_CP013303
• Coordinates: 2881892..2882899 (-)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain CRC711
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2876892..2887899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASZ82_RS13640 (ASZ82_02682)	rraA	2877467..2877982 (-)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-
ASZ82_RS13645 (ASZ82_02683)	-	2878057..2878974 (-)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ASZ82_RS13650 (ASZ82_02684)	hslU	2879078..2880409 (-)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
ASZ82_RS13655 (ASZ82_02685)	hslV	2880475..2881032 (-)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
ASZ82_RS13660	-	2881169..2881720 (-)	552	WP_001884022.1	SPOR domain-containing protein	-
ASZ82_RS13665 (ASZ82_02688)	cytR	2881892..2882899 (-)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
ASZ82_RS13670 (ASZ82_02689)	priA	2883205..2885409 (-)	2205	WP_001247858.1	primosomal protein N'	-
ASZ82_RS13675	rpmE	2885664..2885882 (+)	219	WP_000643446.1	50S ribosomal protein L31	-
ASZ82_RS13680 (ASZ82_02692)	-	2886190..2887467 (+)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
ASZ82_RS13685 (ASZ82_02693)	metJ	2887578..2887895 (-)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=161695 ASZ82_RS13665 WP_000224452.1 2881892..2882899(-) (cytR) [Vibrio cholerae strain CRC711]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=161695 ASZ82_RS13665 WP_000224452.1 2881892..2882899(-) (cytR) [Vibrio cholerae strain CRC711]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904