Detailed information
Bioinformatically predicted
Overview
| Name | comFA | Type | Machinery gene |
| Locus tag | ATN06_RS26345 | Genome accession | NZ_CP013274 |
| Coordinates | 4992514..4993863 (-) | Length | 449 a.a. |
| NCBI ID | WP_060632877.1 | Uniprot ID | A0A243GV89 |
| Organism | Bacillus thuringiensis strain CTC | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4987514..4998863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATN06_RS26325 (ATN06_26090) | secA | 4987842..4990349 (-) | 2508 | WP_060632874.1 | preprotein translocase subunit SecA | - |
| ATN06_RS26330 (ATN06_26095) | hpf | 4990624..4991166 (-) | 543 | WP_060632875.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| ATN06_RS26335 (ATN06_26100) | cspC | 4991486..4991683 (-) | 198 | WP_001990088.1 | cold shock protein CspC | - |
| ATN06_RS26340 (ATN06_26105) | - | 4991810..4992514 (-) | 705 | WP_060632876.1 | ComF family protein | - |
| ATN06_RS26345 (ATN06_26110) | comFA | 4992514..4993863 (-) | 1350 | WP_060632877.1 | ATP-dependent helicase ComFA | Machinery gene |
| ATN06_RS26350 (ATN06_26115) | - | 4993991..4995406 (-) | 1416 | WP_060632878.1 | NlpC/P60 family protein | - |
| ATN06_RS26355 (ATN06_26120) | - | 4995553..4995867 (-) | 315 | WP_000400857.1 | winged helix-turn-helix transcriptional regulator | - |
| ATN06_RS26365 (ATN06_26130) | - | 4996041..4996883 (-) | 843 | WP_060632879.1 | DegV family protein | - |
| ATN06_RS26370 (ATN06_26135) | - | 4997123..4997758 (+) | 636 | WP_060632880.1 | YigZ family protein | - |
Sequence
Protein
Download Length: 449 a.a. Molecular weight: 51160.88 Da Isoelectric Point: 9.8158
>NTDB_id=161302 ATN06_RS26345 WP_060632877.1 4992514..4993863(-) (comFA) [Bacillus thuringiensis strain CTC]
MFAGKQLLLEEISSDLRRELSDLKEKGEIVCVQGVIKKDSKYTCQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKGKCSKNPLHWKGMLSAGQELAAQGVIEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPHINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKHPIFL
FVPHVRYIEDVSLLLKGLDNRIDGVHAEDPMRKEKVTSFRQGDIPLLVTTTILERGVTVKNLQVAVLGVEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTEAMVRAKKHIQRMNKIAKEQGLID
MFAGKQLLLEEISSDLRRELSDLKEKGEIVCVQGVIKKDSKYTCQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKGKCSKNPLHWKGMLSAGQELAAQGVIEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPHINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKHPIFL
FVPHVRYIEDVSLLLKGLDNRIDGVHAEDPMRKEKVTSFRQGDIPLLVTTTILERGVTVKNLQVAVLGVEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTEAMVRAKKHIQRMNKIAKEQGLID
Nucleotide
Download Length: 1350 bp
>NTDB_id=161302 ATN06_RS26345 WP_060632877.1 4992514..4993863(-) (comFA) [Bacillus thuringiensis strain CTC]
ATGTTTGCTGGGAAACAGTTGCTATTAGAAGAAATATCTTCAGACTTAAGGAGAGAATTAAGTGATTTAAAAGAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAATAAAGAAGGATTCTAAATATACGTGTCAGCGGTGTGGAAATATAGAGCAGCGGC
TATTCGCATCATTTTTATGCAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTACTGTACTTGTTCGAGGAATCGCTGAAAGGAAAGGTAAGTGTAGTAAGAATCCGTTACATTGGAAAGGAATGCT
ATCTGCTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTGTTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACAGATGTTGTACTGGAATTAGCACCAAGATTGCAAGAAGTGTTTCCACATATAAATGTAGCTGCTTTATACGG
AGGGAGCGTAGATCGTGAAAAGGATGCAGCGTTAGTCGTTGCAACGACTCATCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAACAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGGGGGAAACAAAA
AGGTATCATTGTTTCAGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGCTAAAAATGAACTTAAACAAAAAACATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGATGTGAGCCTGTTATTGAAAGGATTGGATAATCGAATCGACGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGACATCCTTTAGACAGGGAGACATTCCGTTATTAGTTACAACAACAATTTTAG
AAAGGGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGTGGAAGAAGAAATCTTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGCAAGACAGAGGC
GATGGTACGTGCGAAAAAACATATTCAACGTATGAACAAAATTGCGAAAGAACAAGGGCTAATCGATTAA
ATGTTTGCTGGGAAACAGTTGCTATTAGAAGAAATATCTTCAGACTTAAGGAGAGAATTAAGTGATTTAAAAGAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAATAAAGAAGGATTCTAAATATACGTGTCAGCGGTGTGGAAATATAGAGCAGCGGC
TATTCGCATCATTTTTATGCAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTACTGTACTTGTTCGAGGAATCGCTGAAAGGAAAGGTAAGTGTAGTAAGAATCCGTTACATTGGAAAGGAATGCT
ATCTGCTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTGTTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACAGATGTTGTACTGGAATTAGCACCAAGATTGCAAGAAGTGTTTCCACATATAAATGTAGCTGCTTTATACGG
AGGGAGCGTAGATCGTGAAAAGGATGCAGCGTTAGTCGTTGCAACGACTCATCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAACAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGGGGGAAACAAAA
AGGTATCATTGTTTCAGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGCTAAAAATGAACTTAAACAAAAAACATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGATGTGAGCCTGTTATTGAAAGGATTGGATAATCGAATCGACGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGACATCCTTTAGACAGGGAGACATTCCGTTATTAGTTACAACAACAATTTTAG
AAAGGGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGTGGAAGAAGAAATCTTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGCAAGACAGAGGC
GATGGTACGTGCGAAAAAACATATTCAACGTATGAACAAAATTGCGAAAGAACAAGGGCTAATCGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFA | Bacillus subtilis subsp. subtilis str. 168 |
50.691 |
96.659 |
0.49 |
| comFA | Latilactobacillus sakei subsp. sakei 23K |
40.594 |
89.978 |
0.365 |