Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ATN06_RS21270 Genome accession   NZ_CP013274
Coordinates   4094013..4094807 (-) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus thuringiensis strain CTC     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4089013..4099807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATN06_RS21240 (ATN06_21010) - 4090297..4090530 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  ATN06_RS21245 (ATN06_21015) - 4090579..4091307 (-) 729 WP_060632222.1 glycerophosphodiester phosphodiesterase -
  ATN06_RS21250 (ATN06_21020) - 4091358..4091504 (+) 147 WP_001247671.1 YycC family protein -
  ATN06_RS21255 (ATN06_21025) - 4091683..4092252 (-) 570 WP_060632223.1 imm11 family protein -
  ATN06_RS29540 - 4092287..4093439 (-) 1153 Protein_4087 AHH domain-containing protein -
  ATN06_RS21270 (ATN06_21040) spo0A 4094013..4094807 (-) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  ATN06_RS21280 (ATN06_21050) spoIVB 4095095..4096393 (-) 1299 WP_060632225.1 SpoIVB peptidase -
  ATN06_RS21285 (ATN06_21055) recN 4096512..4098251 (-) 1740 WP_000947767.1 DNA repair protein RecN Machinery gene
  ATN06_RS21290 (ATN06_21060) argR 4098519..4098968 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=161289 ATN06_RS21270 WP_033686380.1 4094013..4094807(-) (spo0A) [Bacillus thuringiensis strain CTC]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=161289 ATN06_RS21270 WP_033686380.1 4094013..4094807(-) (spo0A) [Bacillus thuringiensis strain CTC]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACGGCATTTGGGCAAGAAGATGTGACGAAAAAAGCAGTCGACTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACTATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGATATATGTACTTAAGGGAAGCAATTTCTATGGTGTATAACGATATAGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAAAAATATAATACAACAGCAAGCCGTGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGAAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment