Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ATN06_RS00380 | Genome accession | NZ_CP013274 |
| Coordinates | 26504..26788 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis strain CTC | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 21504..31788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATN06_RS00345 (ATN06_00130) | tmk | 21658..22284 (+) | 627 | WP_060629169.1 | dTMP kinase | - |
| ATN06_RS00350 (ATN06_00135) | holB | 22320..23303 (+) | 984 | WP_060629170.1 | DNA polymerase III subunit delta' | - |
| ATN06_RS00355 (ATN06_00140) | - | 23309..24136 (+) | 828 | WP_000272429.1 | PSP1 domain-containing protein | - |
| ATN06_RS00360 (ATN06_00145) | yabA | 24151..24501 (+) | 351 | WP_000412056.1 | DNA replication initiation control protein YabA | - |
| ATN06_RS00365 (ATN06_00150) | - | 24622..25362 (+) | 741 | WP_060629171.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ATN06_RS00370 (ATN06_00155) | - | 25349..25639 (+) | 291 | WP_060629172.1 | GIY-YIG nuclease family protein | - |
| ATN06_RS00375 (ATN06_00160) | rsmI | 25608..26483 (+) | 876 | WP_060629173.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ATN06_RS00380 (ATN06_00165) | abrB | 26504..26788 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ATN06_RS00385 (ATN06_00170) | metG | 27310..29292 (+) | 1983 | WP_060629174.1 | methionine--tRNA ligase | - |
| ATN06_RS00390 (ATN06_00175) | - | 29459..30226 (+) | 768 | WP_060629175.1 | TatD family hydrolase | - |
| ATN06_RS00395 (ATN06_00180) | rnmV | 30443..31000 (+) | 558 | WP_000692830.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=161262 ATN06_RS00380 WP_000843036.1 26504..26788(-) (abrB) [Bacillus thuringiensis strain CTC]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=161262 ATN06_RS00380 WP_000843036.1 26504..26788(-) (abrB) [Bacillus thuringiensis strain CTC]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGACGAGAAAATCATCTTAAAAAAATATAAGCCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGACGAGAAAATCATCTTAAAAAAATATAAGCCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |