Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FORC22_RS14720 | Genome accession | NZ_CP013248 |
| Coordinates | 3021429..3021944 (-) | Length | 171 a.a. |
| NCBI ID | WP_005480477.1 | Uniprot ID | Q87L65 |
| Organism | Vibrio parahaemolyticus strain FORC_022 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3016429..3026944
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC22_RS14705 (FORC22_2781) | aroB | 3017810..3018910 (-) | 1101 | WP_005480443.1 | 3-dehydroquinate synthase | - |
| FORC22_RS14710 (FORC22_2782) | aroK | 3018942..3019460 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| FORC22_RS14715 (FORC22_2783) | pilQ | 3019649..3021397 (-) | 1749 | WP_071652432.1 | type IV pilus secretin PilQ | Machinery gene |
| FORC22_RS14720 (FORC22_2784) | pilP | 3021429..3021944 (-) | 516 | WP_005480477.1 | pilus assembly protein PilP | Machinery gene |
| FORC22_RS14725 (FORC22_2785) | pilO | 3021934..3022527 (-) | 594 | WP_005480482.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FORC22_RS14730 (FORC22_2786) | pilN | 3022520..3023098 (-) | 579 | WP_005480484.1 | PilN domain-containing protein | Machinery gene |
| FORC22_RS14735 (FORC22_2787) | pilM | 3023082..3024098 (-) | 1017 | WP_071652433.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| FORC22_RS14740 (FORC22_2788) | - | 3024241..3026811 (+) | 2571 | WP_005496567.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18928.09 Da Isoelectric Point: 10.5314
>NTDB_id=161197 FORC22_RS14720 WP_005480477.1 3021429..3021944(-) (pilP) [Vibrio parahaemolyticus strain FORC_022]
MRNKSLLTVLVSALLVGCQANDESLTDFIRGVESQARRDVEKLKPADKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
MRNKSLLTVLVSALLVGCQANDESLTDFIRGVESQARRDVEKLKPADKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=161197 FORC22_RS14720 WP_005480477.1 3021429..3021944(-) (pilP) [Vibrio parahaemolyticus strain FORC_022]
ATGAGAAATAAATCTTTGCTGACGGTGTTGGTAAGCGCTCTATTGGTTGGGTGCCAGGCTAATGATGAATCATTAACGGA
TTTTATTCGTGGTGTTGAGAGCCAGGCTAGGCGAGATGTGGAGAAGCTCAAACCTGCTGACAAATACATCGCAGTGGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGTATGGGGAACACCGTTTCTGGTTTAGTACAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGGTGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
ATGAGAAATAAATCTTTGCTGACGGTGTTGGTAAGCGCTCTATTGGTTGGGTGCCAGGCTAATGATGAATCATTAACGGA
TTTTATTCGTGGTGTTGAGAGCCAGGCTAGGCGAGATGTGGAGAAGCTCAAACCTGCTGACAAATACATCGCAGTGGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGTATGGGGAACACCGTTTCTGGTTTAGTACAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGGTGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
83.626 |
100 |
0.836 |
| pilP | Vibrio cholerae strain A1552 |
58.14 |
100 |
0.585 |