Detailed information NTG0161169

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC22_RS01190
• Genome accession: NZ_CP013248
• Coordinates: 251533..252540 (-)
• Length: 335 a.a.
• NCBI ID: WP_071651762.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain FORC_022
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 246533..257540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC22_RS01160 (FORC22_0225)	zapB	246704..246946 (+)	243	WP_005481417.1	cell division protein ZapB	-
FORC22_RS01165 (FORC22_0226)	rraA	247051..247563 (-)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
FORC22_RS01170 (FORC22_0227)	-	247640..248557 (-)	918	WP_071651761.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC22_RS01175 (FORC22_0228)	hslU	248742..250073 (-)	1332	WP_021449544.1	HslU--HslV peptidase ATPase subunit	-
FORC22_RS01180 (FORC22_0229)	hslV	250097..250648 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
FORC22_RS01185 (FORC22_0230)	ftsN	250812..251357 (-)	546	WP_005484027.1	cell division protein FtsN	-
FORC22_RS01190 (FORC22_0231)	cytR	251533..252540 (-)	1008	WP_071651762.1	DNA-binding transcriptional regulator CytR	Regulator
FORC22_RS01195 (FORC22_0232)	priA	252873..255077 (-)	2205	WP_071651763.1	primosomal protein N'	-
FORC22_RS01200 (FORC22_0233)	rpmE	255372..255593 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
FORC22_RS01205 (FORC22_0234)	rpsJ	256051..256362 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
FORC22_RS01210 (FORC22_0235)	rplC	256377..257006 (+)	630	WP_071651764.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36865.38 Da
• Isoelectric Point: 6.4938

>NTDB_id=161169 FORC22_RS01190 WP_071651762.1 251533..252540(-) (cytR) [Vibrio parahaemolyticus strain FORC_022]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRTGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=161169 FORC22_RS01190 WP_071651762.1 251533..252540(-) (cytR) [Vibrio parahaemolyticus strain FORC_022]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGATATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCTCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
TTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTGTTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCACGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGTGTTCCACAAGATCT
GTCGGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTGAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	99.701	100	0.997
cytR	Vibrio cholerae C6706	90.419	99.701	0.901