Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   A6L28_RS00775 Genome accession   NZ_CP016645
Coordinates   133042..134301 (-) Length   419 a.a.
NCBI ID   WP_002223278.1    Uniprot ID   Q05014
Organism   Neisseria meningitidis strain M12752     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 128042..139301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L28_RS13180 (A6L28_00750) - 128347..128496 (-) 150 WP_033908890.1 hypothetical protein -
  A6L28_RS00755 (A6L28_00755) - 128514..128711 (-) 198 WP_002218528.1 hypothetical protein -
  A6L28_RS00760 (A6L28_00760) - 128722..129738 (-) 1017 WP_002215314.1 lysozyme inhibitor LprI family protein -
  A6L28_RS00765 (A6L28_00765) gltS 129837..131051 (-) 1215 WP_002216198.1 sodium/glutamate symporter -
  A6L28_RS00770 (A6L28_00770) - 131269..132675 (-) 1407 WP_002228855.1 tetratricopeptide repeat protein -
  A6L28_RS00775 (A6L28_00775) kpsS 133042..134301 (-) 1260 WP_002223278.1 capsule biosynthesis protein Regulator
  A6L28_RS00780 (A6L28_00780) - 134438..136486 (-) 2049 WP_002228852.1 capsular polysaccharide biosynthesis protein -
  A6L28_RS00785 (A6L28_00785) rfbC 136648..137187 (-) 540 WP_002218523.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  A6L28_RS00790 (A6L28_00790) rfbA 137242..138111 (-) 870 WP_002257595.1 glucose-1-phosphate thymidylyltransferase RfbA -
  A6L28_RS00795 (A6L28_00795) rfbB 138174..139256 (-) 1083 WP_002224375.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 48701.63 Da        Isoelectric Point: 9.0748

>NTDB_id=161069 A6L28_RS00775 WP_002223278.1 133042..134301(-) (kpsS) [Neisseria meningitidis strain M12752]
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSNSSTPVI

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=161069 A6L28_RS00775 WP_002223278.1 133042..134301(-) (kpsS) [Neisseria meningitidis strain M12752]
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGCAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAGTTTTTGCAA
GAATACATCACTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTACAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAGCACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCGATGGACCGCGGTTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGCGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTCACCATCAACAGCACCAGCGGCCTGTCCGGACTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGCATTACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTGTTTTTCCCCAACAAAAAAACCTCCAACTCTTCCACACCAGTAATCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q05014

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

38.579

94.033

0.363