Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   APQ13_RS07665 Genome accession   NZ_CP013237
Coordinates   1590970..1591740 (-) Length   256 a.a.
NCBI ID   WP_002267292.1    Uniprot ID   -
Organism   Streptococcus mutans strain NG8 isolate Dental Plaque     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1585970..1596740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  APQ13_RS07645 (APQ13_07630) ychF 1586386..1587501 (-) 1116 WP_002267294.1 redox-regulated ATPase YchF -
  APQ13_RS07650 (APQ13_07635) - 1587665..1587856 (-) 192 WP_002264634.1 DUF951 domain-containing protein -
  APQ13_RS07655 (APQ13_07640) dnaN 1588118..1589254 (-) 1137 WP_002267293.1 DNA polymerase III subunit beta -
  APQ13_RS07660 (APQ13_07645) dnaA 1589410..1590768 (-) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  APQ13_RS07665 (APQ13_07650) spo0J 1590970..1591740 (-) 771 WP_002267292.1 ParB/RepB/Spo0J family partition protein Regulator
  APQ13_RS07670 (APQ13_07655) htrA 1592220..1593428 (-) 1209 WP_002262650.1 S1C family serine protease Regulator
  APQ13_RS07675 (APQ13_07660) rlmH 1593634..1594113 (+) 480 WP_002267291.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  APQ13_RS07680 (APQ13_07665) - 1594457..1595119 (+) 663 WP_002262652.1 YoaK family protein -

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29507.13 Da        Isoelectric Point: 10.0178

>NTDB_id=160996 APQ13_RS07665 WP_002267292.1 1590970..1591740(-) (spo0J) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKEPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=160996 APQ13_RS07665 WP_002267292.1 1590970..1591740(-) (spo0J) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTACACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAGAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCCTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.219

100

0.992


Multiple sequence alignment