Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CPter291_RS03975 Genome accession   NZ_CP013236
Coordinates   882164..882580 (+) Length   138 a.a.
NCBI ID   WP_061937383.1    Uniprot ID   A0A127PZX7
Organism   Collimonas pratensis strain Ter291     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 877164..887580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPter291_RS03950 (CPter291_0830) mtgA 877482..878177 (+) 696 WP_061937372.1 monofunctional biosynthetic peptidoglycan transglycosylase -
  CPter291_RS03955 (CPter291_0832) corA 878445..879410 (+) 966 WP_061937375.1 magnesium/cobalt transporter CorA -
  CPter291_RS03960 (CPter291_0833) hemL 879517..880800 (-) 1284 WP_062112113.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CPter291_RS03965 (CPter291_0834) thiD 880885..881742 (-) 858 WP_062112115.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CPter291_RS03970 (CPter291_0835) - 881850..882002 (+) 153 WP_061945830.1 rubredoxin -
  CPter291_RS03975 (CPter291_0836) pilG 882164..882580 (+) 417 WP_061937383.1 response regulator Regulator
  CPter291_RS03980 (CPter291_0837) - 882673..883038 (+) 366 WP_038485766.1 response regulator -
  CPter291_RS03985 (CPter291_0838) - 883105..883701 (+) 597 WP_062112117.1 chemotaxis protein CheW -
  CPter291_RS03990 (CPter291_0839) - 883769..886156 (+) 2388 WP_062112119.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 14904.25 Da        Isoelectric Point: 7.8793

>NTDB_id=160942 CPter291_RS03975 WP_061937383.1 882164..882580(+) (pilG) [Collimonas pratensis strain Ter291]
MTTSLGGVNLKVMVIDDSSTIRRSAEIFLSQAGYQVVLAEDGFDALAKVNDHKPALIFCDILMPRLDGYQTCALIKKSAK
FHATPVVMLSSKDGLFDRARGAMVGSDEYLTKPFTKDSLLKAVRQHTQSVDGAVPAVA

Nucleotide


Download         Length: 417 bp        

>NTDB_id=160942 CPter291_RS03975 WP_061937383.1 882164..882580(+) (pilG) [Collimonas pratensis strain Ter291]
ATGACAACATCACTTGGCGGCGTCAACCTGAAGGTAATGGTGATTGACGATAGCAGCACGATTCGTCGTTCTGCGGAGAT
TTTCCTGAGCCAGGCCGGTTATCAGGTGGTACTGGCCGAAGACGGCTTCGATGCCTTGGCGAAAGTCAACGATCATAAAC
CTGCACTGATTTTTTGCGACATTCTGATGCCTCGCCTGGATGGCTATCAAACCTGCGCCCTGATCAAAAAGAGCGCCAAA
TTCCATGCAACGCCGGTGGTCATGCTGTCGTCCAAGGACGGCTTGTTTGACCGCGCCCGCGGCGCCATGGTCGGTTCAGA
CGAGTACCTCACCAAGCCGTTCACCAAGGACAGCCTGCTGAAGGCGGTGCGCCAGCATACCCAGAGTGTGGATGGCGCCG
TGCCGGCGGTGGCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127PZX7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.463

87.681

0.565

Multiple sequence alignment