Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CAter282_RS03550 Genome accession   NZ_CP013235
Coordinates   755884..756300 (+) Length   138 a.a.
NCBI ID   WP_061536975.1    Uniprot ID   -
Organism   Collimonas arenae strain Ter282     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 750884..761300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAter282_RS03525 (CAter282_0755) mtgA 751346..752041 (+) 696 WP_061532311.1 monofunctional biosynthetic peptidoglycan transglycosylase -
  CAter282_RS03530 (CAter282_0756) corA 752145..753110 (+) 966 WP_061536972.1 magnesium/cobalt transporter CorA -
  CAter282_RS03535 (CAter282_0757) hemL 753254..754537 (-) 1284 WP_061532312.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CAter282_RS03540 (CAter282_0758) thiD 754619..755470 (-) 852 WP_061536973.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CAter282_RS03545 (CAter282_0759) - 755569..755721 (+) 153 WP_061536974.1 rubredoxin -
  CAter282_RS03550 (CAter282_0760) pilG 755884..756300 (+) 417 WP_061536975.1 response regulator Regulator
  CAter282_RS03555 (CAter282_0761) - 756359..756724 (+) 366 WP_061532314.1 response regulator -
  CAter282_RS03560 (CAter282_0762) - 756797..757390 (+) 594 WP_061536976.1 chemotaxis protein CheW -
  CAter282_RS03565 (CAter282_0763) - 757458..759863 (+) 2406 WP_231879155.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 14905.24 Da        Isoelectric Point: 7.8793

>NTDB_id=160920 CAter282_RS03550 WP_061536975.1 755884..756300(+) (pilG) [Collimonas arenae strain Ter282]
MTTSLGGVNLKVMVIDDSSTIRRSAEIFLSQAGYQVVLAEDGFDALAKVNDHKPALIFCDILMPRLDGYQTCALIKKSAK
FHATPVIMLSSKDGLFDRARGAMVGSDEYLTKPFTKDSLLKAVRQHTQAADGAIAVNA

Nucleotide


Download         Length: 417 bp        

>NTDB_id=160920 CAter282_RS03550 WP_061536975.1 755884..756300(+) (pilG) [Collimonas arenae strain Ter282]
ATGACAACATCACTTGGCGGCGTCAACCTGAAGGTAATGGTGATCGACGATAGCAGCACAATTCGGCGTTCCGCGGAGAT
TTTCCTGAGTCAGGCCGGCTATCAGGTTGTACTTGCCGAGGATGGTTTCGACGCCTTGGCGAAAGTTAACGATCATAAGC
CGGCGCTGATTTTTTGCGACATCCTGATGCCTCGTCTCGACGGTTATCAAACCTGTGCGCTGATCAAGAAAAGCGCCAAA
TTCCATGCTACACCGGTAATCATGCTGTCGTCCAAGGACGGCTTGTTCGACCGCGCACGTGGCGCCATGGTCGGTTCCGA
CGAATATCTTACCAAGCCGTTTACCAAGGACAGTCTGCTCAAGGCGGTGCGTCAGCACACCCAGGCAGCCGACGGCGCGA
TTGCAGTCAATGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.463

87.681

0.565

Multiple sequence alignment