Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ASO14_RS01205 Genome accession   NZ_CP013217
Coordinates   224901..225857 (+) Length   318 a.a.
NCBI ID   WP_068450486.1    Uniprot ID   A0A0X1RZM6
Organism   Kurthia sp. 11kri321     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 219901..230857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASO14_RS01190 (ASO14_243) - 220568..221272 (+) 705 WP_068450481.1 VOC family protein -
  ASO14_RS01195 (ASO14_244) hflX 221513..222784 (+) 1272 WP_068450483.1 GTPase HflX -
  ASO14_RS01200 (ASO14_245) - 223093..224580 (+) 1488 WP_068450485.1 peptide MFS transporter -
  ASO14_RS01205 (ASO14_246) ceuB 224901..225857 (+) 957 WP_068450486.1 ABC transporter permease Machinery gene
  ASO14_RS01210 (ASO14_247) - 225844..226797 (+) 954 WP_068450491.1 iron chelate uptake ABC transporter family permease subunit -
  ASO14_RS01215 (ASO14_248) - 226794..227558 (+) 765 WP_068450493.1 ATP-binding cassette domain-containing protein -
  ASO14_RS01220 (ASO14_249) - 227575..228564 (+) 990 WP_068450495.1 siderophore ABC transporter substrate-binding protein -
  ASO14_RS15240 - 228615..229295 (-) 681 WP_250635776.1 FAD-dependent oxidoreductase -
  ASO14_RS15245 (ASO14_251) - 229196..229741 (-) 546 WP_068450499.1 FAD-dependent oxidoreductase -
  ASO14_RS01235 (ASO14_252) - 229852..230451 (+) 600 WP_068450501.1 phosphatase PAP2 family protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35106.56 Da        Isoelectric Point: 10.3058

>NTDB_id=160736 ASO14_RS01205 WP_068450486.1 224901..225857(+) (ceuB) [Kurthia sp. 11kri321]
MKKRYLFIALILLSLLSLFVGVSRISPMDLLDFGSEETQIFLISRVPRLVAIILAGVGMSIAGLIMQSLSRNKFVSPTTA
GTLDATKLGILVSMMIFVNATLLERMVVAFVFALAGTLLFMQILNRIKFKDAIFIPLIGMMFGNILNSITTFFAYKMNII
QNLSTWLQGDFSTILKGRYELLYISVPILIIAYFYANRFTVAGMGEDFAKNLGIKYKRIVNFGLVLVALISTSVVLTVGV
IPFVGLIIPNIVSIFKGDNLAKTLPHTALLGAIFLLICDILGRVLIYPYEISISLMVGVIGSAIFLYLLMRGRAYAQQ

Nucleotide


Download         Length: 957 bp        

>NTDB_id=160736 ASO14_RS01205 WP_068450486.1 224901..225857(+) (ceuB) [Kurthia sp. 11kri321]
ATGAAGAAAAGATATCTTTTTATAGCGCTTATATTGTTATCACTTCTTTCATTATTTGTAGGAGTGAGTCGCATATCACC
AATGGACTTACTGGACTTCGGTTCAGAAGAGACACAAATCTTTTTGATTAGTCGTGTACCAAGACTTGTAGCGATCATCT
TAGCAGGTGTAGGGATGAGTATTGCAGGTTTAATCATGCAAAGCTTGAGCCGTAATAAGTTCGTATCACCAACTACTGCT
GGTACGCTCGATGCAACCAAACTTGGTATTTTAGTATCCATGATGATTTTTGTGAATGCAACCCTACTTGAGAGAATGGT
CGTTGCTTTTGTATTCGCGCTAGCCGGCACGCTATTATTCATGCAAATTTTAAATCGAATCAAATTTAAAGACGCCATTT
TTATTCCTTTAATCGGGATGATGTTTGGTAATATTCTAAATTCAATTACGACATTCTTTGCGTATAAGATGAATATTATT
CAAAACTTATCAACTTGGCTACAAGGGGATTTCTCAACGATTCTGAAAGGTCGTTATGAACTTCTTTACATAAGTGTTCC
GATTCTCATCATTGCCTATTTTTATGCCAACCGTTTTACAGTTGCAGGAATGGGAGAAGACTTTGCTAAAAACTTAGGGA
TTAAATACAAACGTATTGTAAACTTTGGTTTAGTGTTAGTGGCACTTATTTCAACATCTGTTGTATTAACAGTTGGTGTG
ATTCCATTCGTTGGATTAATCATTCCAAATATCGTCTCGATTTTCAAAGGCGATAACTTAGCGAAAACATTGCCGCATAC
TGCTTTACTCGGTGCGATTTTCCTACTCATTTGTGACATTTTAGGTCGAGTGCTCATCTATCCATATGAAATCTCAATCA
GTCTCATGGTAGGCGTTATCGGTAGTGCCATCTTCCTTTATCTATTAATGAGGGGGCGAGCATATGCGCAACAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X1RZM6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.443

96.541

0.506

Multiple sequence alignment