Detailed information NTG0160697

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: BBH51_RS06630
• Genome accession: NZ_CP016553
• Coordinates: 1355819..1357243 (+)
• Length: 474 a.a.
• NCBI ID: WP_014702199.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain IDH781
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1350819..1362243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBH51_RS06625 (BBH51_06625)	-	1354932..1355804 (+)	873	WP_005538868.1	DMT family transporter	-
BBH51_RS06630 (BBH51_06630)	sbcB	1355819..1357243 (+)	1425	WP_014702199.1	exodeoxyribonuclease I	Machinery gene
BBH51_RS06635 (BBH51_06635)	ftnA	1358134..1358619 (+)	486	WP_005538870.1	non-heme ferritin	-
BBH51_RS06640 (BBH51_06640)	ftnA	1358635..1359132 (+)	498	WP_005538871.1	non-heme ferritin	-
BBH51_RS12360	-	1359194..1359364 (-)	171	WP_005538872.1	hypothetical protein	-
BBH51_RS06645 (BBH51_06645)	-	1359473..1360246 (+)	774	WP_005538873.1	FNR family transcription factor	-
BBH51_RS06650 (BBH51_06650)	uspE	1360364..1361296 (+)	933	WP_005538874.1	universal stress protein UspE	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 54830.36 Da
• Isoelectric Point: 5.4219

>NTDB_id=160697 BBH51_RS06630 WP_014702199.1 1355819..1357243(+) (sbcB) [Aggregatibacter actinomycetemcomitans strain IDH781]
MAKNDFSFFIYDYESFGVNPAKDRPAQFGGIRTDADFNIIGEPIVLYCKQTNDYLPAPEAVLVTGITPQECNEKGLSEPE
FAAKILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPS
FRLEKLTEANGIAHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGMLGNYRGNT
TLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGALPVPLKLIHINKCPIVAPAKTLLPQNAE
RLGIDQELCAKNRQRLQEARDIRQKVMDIFHQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDP
RIPELLFHYRARHFYRTLNRAEQIKWQKYCRKKLDAEALQFEQRLQELAEQYSNNEENLMLLQKVYEYGAQIIG

Nucleotide

• Length: 1425 bp

>NTDB_id=160697 BBH51_RS06630 WP_014702199.1 1355819..1357243(+) (sbcB) [Aggregatibacter actinomycetemcomitans strain IDH781]
ATGGCAAAAAACGACTTTAGTTTTTTTATTTATGATTACGAAAGCTTTGGGGTTAATCCCGCAAAGGATCGCCCGGCACA
ATTCGGTGGCATTCGTACCGACGCAGATTTTAATATTATCGGTGAGCCGATTGTCCTTTATTGCAAGCAAACTAACGATT
ATTTGCCGGCACCGGAAGCGGTTTTAGTCACCGGAATTACACCACAGGAATGCAACGAAAAAGGGCTGTCGGAACCCGAA
TTTGCCGCCAAAATTTTACAGGAATTCAGCCGTCCGAATACTTGCGTGATGGGCTTTAATAACATTCGTTATGACGATGA
AATGACCCGTTATACGTTTTACCGTAATTTTATCGATCCTTATGAATACAGCTGGAAAAACGGCAATTCCCGTTGGGATT
TGCTGGATTTGGTGCGTGCTTGCTATGCGTTGCGTCCGGACGGTATTGAATGGCCTTTAGATGATGAAGGTATGCCGAGT
TTCCGCCTGGAAAAACTGACAGAGGCCAATGGAATAGCGCACGATAATGCGCATGATGCCATGTCAGATGTGTATGCCAC
TATTGAAATGGCAAAGCTCATCAAGCAGAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGGGGTAAAAAAGAGG
TTGAAAAGCTCATCGATACTGCAGAAATGACACCATTGGTACATGTATCGGGAATGTTGGGGAATTATCGCGGAAATACC
ACGTTAATTGCATCTTTAGCCTGGCATCCGACGAATAAAAATGCCGTTATTGTGTGTGATTTAACTGCCAATATTGATGA
TTTATTAACAAAATCGGTAGAGGAGTTGCGTGAAAATCTTTACACCAAAAAAGAGACCTTATTGGCTGCCGGTGCATTGC
CAGTGCCATTGAAGCTCATTCATATCAATAAATGTCCGATTGTTGCGCCGGCTAAAACTTTATTGCCGCAAAACGCCGAA
CGTCTAGGCATTGATCAGGAATTATGCGCAAAAAATCGACAACGTTTGCAGGAAGCAAGAGATATTCGCCAAAAAGTAAT
GGATATTTTTCATCAGGAACGTGAATTTGACGCTTCCGATAATGTTGAAACCAAACTGTATAACGGCTTTTTTAGTGACG
CCGATAAAAACAATATGGCGATTTTACGCAGTTTGGAACCCGAAAAATTGGCTAAACATAATCTTAGTTTTCAAGATCCA
CGAATTCCTGAATTACTGTTCCATTATCGTGCCAGACATTTCTATCGTACATTGAACCGTGCGGAACAAATTAAATGGCA
AAAATACTGCCGTAAAAAATTAGATGCCGAGGCTTTGCAATTTGAACAACGTCTTCAAGAATTAGCCGAACAATATTCCA
ACAATGAAGAAAATCTTATGTTATTGCAAAAGGTCTATGAATATGGAGCCCAAATAATCGGTTAA

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (10-189)

• Exonuclease C-terminal (ExoI_SH3) (209-470)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.545	97.468	0.532