Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BBH51_RS02070 | Genome accession | NZ_CP016553 |
| Coordinates | 410128..412698 (+) | Length | 856 a.a. |
| NCBI ID | WP_005549506.1 | Uniprot ID | A0A5D0EK91 |
| Organism | Aggregatibacter actinomycetemcomitans strain IDH781 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 405128..417698
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBH51_RS12310 (BBH51_02040) | - | 405185..405385 (+) | 201 | WP_005539157.1 | phosphoribosyl-AMP cyclohydrolase | - |
| BBH51_RS02045 (BBH51_02045) | nfuA | 405572..406156 (-) | 585 | WP_005539159.1 | Fe-S biogenesis protein NfuA | - |
| BBH51_RS02050 (BBH51_02050) | - | 406268..406954 (-) | 687 | WP_005539162.1 | DNA utilization protein GntX | - |
| BBH51_RS02055 (BBH51_02055) | - | 407100..407912 (+) | 813 | WP_005539164.1 | Cof-type HAD-IIB family hydrolase | - |
| BBH51_RS02060 (BBH51_02060) | asd | 408096..409208 (+) | 1113 | WP_005539165.1 | aspartate-semialdehyde dehydrogenase | - |
| BBH51_RS02065 (BBH51_02065) | - | 409282..409863 (-) | 582 | WP_005559700.1 | ComEA family DNA-binding protein | - |
| BBH51_RS02070 (BBH51_02070) | clpC | 410128..412698 (+) | 2571 | WP_005549506.1 | ATP-dependent chaperone ClpB | Regulator |
| BBH51_RS02075 (BBH51_02075) | - | 412799..413299 (-) | 501 | WP_033001541.1 | surface-adhesin E family protein | - |
| BBH51_RS02080 (BBH51_02080) | purM | 413482..414510 (+) | 1029 | WP_005544243.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| BBH51_RS02085 (BBH51_02085) | - | 414510..414689 (+) | 180 | WP_005544245.1 | hypothetical protein | - |
| BBH51_RS02090 (BBH51_02090) | dapF | 414768..415592 (+) | 825 | WP_005544246.1 | diaminopimelate epimerase | - |
| BBH51_RS02095 (BBH51_02095) | xerC | 415602..416492 (+) | 891 | WP_005544248.1 | tyrosine recombinase XerC | - |
| BBH51_RS02100 (BBH51_02100) | - | 416507..417220 (+) | 714 | WP_005553253.1 | HAD-IA family hydrolase | - |
Sequence
Protein
Download Length: 856 a.a. Molecular weight: 95868.47 Da Isoelectric Point: 5.1134
>NTDB_id=160669 BBH51_RS02070 WP_005549506.1 410128..412698(+) (clpC) [Aggregatibacter actinomycetemcomitans strain IDH781]
MNIEKFTTKFQQALAEAQSLAVGKDNQFIEPVHLLSALLNQQDGFIAPILTTGGVNVALLRNEINNELAKLPQVSGNGGD
VQISRQLLNILNLCDKLAQQRQDKFISSEIFLLAALEEKGTLSEILKKCGAKKEQILQAIEQIRGGQKVNDQNAEESRQA
LEKYTIDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS
IRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELE
NARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLL
RMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLD
FISDIGYDPIFGARPLKRAIQQEIENPLAQQILSGALLPDKVIDVDYVDGQIVAKQ
MNIEKFTTKFQQALAEAQSLAVGKDNQFIEPVHLLSALLNQQDGFIAPILTTGGVNVALLRNEINNELAKLPQVSGNGGD
VQISRQLLNILNLCDKLAQQRQDKFISSEIFLLAALEEKGTLSEILKKCGAKKEQILQAIEQIRGGQKVNDQNAEESRQA
LEKYTIDLTACAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS
IRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELE
NARTQMEQARRAGDLSKMSELQYGKIPDLEKQLAQAEGAEGKEMSLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLL
RMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSEDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQEHAQEGYDTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLNFTDATLD
FISDIGYDPIFGARPLKRAIQQEIENPLAQQILSGALLPDKVIDVDYVDGQIVAKQ
Nucleotide
Download Length: 2571 bp
>NTDB_id=160669 BBH51_RS02070 WP_005549506.1 410128..412698(+) (clpC) [Aggregatibacter actinomycetemcomitans strain IDH781]
ATGAATATTGAAAAATTTACCACAAAATTCCAACAAGCCTTGGCGGAAGCGCAATCTTTGGCGGTCGGCAAGGATAATCA
ATTTATTGAACCGGTACATTTATTGAGCGCCTTGTTAAATCAACAAGACGGTTTCATAGCACCGATTCTCACCACCGGCG
GCGTGAACGTCGCTTTATTGCGTAACGAAATCAACAACGAGCTTGCCAAGCTCCCGCAAGTGTCCGGCAACGGCGGCGAT
GTGCAAATTTCCCGTCAGTTGCTTAACATCTTGAATTTATGTGACAAATTGGCACAACAACGGCAGGATAAATTCATTTC
GTCCGAAATCTTTTTGCTTGCCGCTTTAGAAGAAAAAGGCACCCTGAGCGAGATTTTGAAAAAGTGCGGTGCGAAAAAAG
AACAGATTTTACAAGCCATCGAGCAGATTCGCGGAGGACAAAAAGTGAATGATCAAAATGCGGAAGAAAGCCGCCAAGCA
CTCGAAAAATATACTATCGACTTAACCGCCTGCGCAGAAAGCGGCAAATTGGATCCGGTGATTGGGCGTGATGAAGAAAT
CCGCCGCACCATTCAAGTGCTGCAACGCCGCACCAAAAACAACCCTGTATTAATTGGTGAACCGGGCGTGGGTAAAACCG
CCATTGTGGAAGGTTTGGCACAACGTATCGTGAACGGCGAAGTGCCGGAAGGCTTGAAAAACAAACGTGTGCTGTCGCTG
GACATGGGCGCGTTAATCGCCGGGGCGAAATATCGAGGCGAATTTGAAGAACGCTTGAAAGCGGTGTTAAACGAACTCGC
CAAAGAAGAAGGCAGAGTGATTTTGTTCATCGATGAAATTCACACCATGGTGGGCGCGGGTAAAACTGACGGCGCGATGG
ATGCAGGCAACCTGCTCAAACCAAGTTTGGCGCGCGGTGAATTGCACTGCGTGGGTGCCACTACCTTGGACGAATATCGT
CAATACATTGAAAAAGACGCGGCGCTTGAACGTCGTTTCCAAAAAGTGTTTGTGGGTGAGCCGAGCGTGGAAGATACCAT
CGCCATTTTGCGCGGTTTGAAAGAGCGTTATGAAATCCACCACCATGTACAAATTACCGACCCGGCAATCGTGGCGGCGG
CAACGCTTTCTCATCGTTATATTTCCGATCGTCAGTTGCCGGATAAAGCCATCGACTTAATCGACGAAGCAGCATCCAGC
ATTCGGATGGAAATCGACTCCAAACCGCAACCGTTAGATCGTTTGGATCGCCGTATTATCCAGCTCAAACTGGAACAACA
GGCGTTGCAAAAAGAAGATGACGATGCCAGCCGTAAACGTTTGGAAATGCTGGAAAAAGAATTGGCGGAAAAAGAACGTG
AATATGCCGAATTAGAAGAAGTGTGGAAATCGGAAAAAGCCGCGCTGTCCGGCACGCAACACATTAAAGCGGAATTGGAA
AATGCCCGCACGCAAATGGAACAAGCACGCCGCGCCGGTGATTTAAGCAAAATGTCCGAATTGCAATACGGCAAAATTCC
GGATTTGGAAAAACAATTAGCCCAAGCGGAAGGTGCCGAGGGCAAAGAAATGAGTCTGTTACGCTATCGCGTGACCGACG
AAGAAATCGCCGAAGTGCTTTCCCGCGCTACCGGTATTCCGGTCGCTAAAATGATGGAAGGCGAAAAAGAAAAATTATTG
CGCATGGAAGAATTCCTGCACAAACGGGTTATCGGTCAAAACGAAGCGGTGGATGCCGTGGCGAACGCTATTCGTCGTAG
CCGCGCCGGTCTTTCCGATCCGAATCGTCCGATTGGTTCCTTCTTATTCTTAGGTCCGACCGGTGTGGGTAAAACTGAGT
TGTGCAAAGCCTTGGCATCCTTCTTATTCGACAGCGAAGATGCCATGGTGCGTATTGATATGTCCGAGTTCATGGAAAAA
CACAGCGTGTCCCGTTTGGTGGGCGCACCTCCGGGCTATGTGGGCTATGAAGAAGGCGGTTACTTAACCGAAGCGGTGCG
TCGCCGTCCGTATTCCGTGATTTTGCTCGACGAAGTGGAAAAAGCGCATCACGATGTGTTTAACATTCTGTTGCAAGTGC
TGGACGACGGTCGTCTCACCGACGGACAAGGCAGAACCGTGGATTTCCGTAATACGGTGGTGATTATGACCTCCAACCTC
GGTTCCGACTTGATTCAGGAACACGCACAGGAAGGGTACGACACCGTGAAAAGCATGGTAATGGAAGTGGTCGGTCGTTA
TTTCCGTCCGGAATTTATCAACCGTATCGACGAAACCGTCATGTTCCACCCGTTGAACAAAGAAAATATTCGTCAAATCG
CCGATATTCAATTAAGACGCTTAACCCGTCGCATGGAAACCCATGGCTATGTGTTGAATTTTACCGATGCCACCCTCGAT
TTCATCAGCGACATCGGTTACGACCCGATTTTCGGTGCACGTCCGCTCAAACGGGCAATTCAACAAGAAATCGAAAATCC
GTTGGCACAACAAATTTTATCCGGCGCCTTGCTGCCTGATAAAGTGATTGATGTGGACTACGTGGACGGTCAAATTGTGG
CAAAACAATAG
ATGAATATTGAAAAATTTACCACAAAATTCCAACAAGCCTTGGCGGAAGCGCAATCTTTGGCGGTCGGCAAGGATAATCA
ATTTATTGAACCGGTACATTTATTGAGCGCCTTGTTAAATCAACAAGACGGTTTCATAGCACCGATTCTCACCACCGGCG
GCGTGAACGTCGCTTTATTGCGTAACGAAATCAACAACGAGCTTGCCAAGCTCCCGCAAGTGTCCGGCAACGGCGGCGAT
GTGCAAATTTCCCGTCAGTTGCTTAACATCTTGAATTTATGTGACAAATTGGCACAACAACGGCAGGATAAATTCATTTC
GTCCGAAATCTTTTTGCTTGCCGCTTTAGAAGAAAAAGGCACCCTGAGCGAGATTTTGAAAAAGTGCGGTGCGAAAAAAG
AACAGATTTTACAAGCCATCGAGCAGATTCGCGGAGGACAAAAAGTGAATGATCAAAATGCGGAAGAAAGCCGCCAAGCA
CTCGAAAAATATACTATCGACTTAACCGCCTGCGCAGAAAGCGGCAAATTGGATCCGGTGATTGGGCGTGATGAAGAAAT
CCGCCGCACCATTCAAGTGCTGCAACGCCGCACCAAAAACAACCCTGTATTAATTGGTGAACCGGGCGTGGGTAAAACCG
CCATTGTGGAAGGTTTGGCACAACGTATCGTGAACGGCGAAGTGCCGGAAGGCTTGAAAAACAAACGTGTGCTGTCGCTG
GACATGGGCGCGTTAATCGCCGGGGCGAAATATCGAGGCGAATTTGAAGAACGCTTGAAAGCGGTGTTAAACGAACTCGC
CAAAGAAGAAGGCAGAGTGATTTTGTTCATCGATGAAATTCACACCATGGTGGGCGCGGGTAAAACTGACGGCGCGATGG
ATGCAGGCAACCTGCTCAAACCAAGTTTGGCGCGCGGTGAATTGCACTGCGTGGGTGCCACTACCTTGGACGAATATCGT
CAATACATTGAAAAAGACGCGGCGCTTGAACGTCGTTTCCAAAAAGTGTTTGTGGGTGAGCCGAGCGTGGAAGATACCAT
CGCCATTTTGCGCGGTTTGAAAGAGCGTTATGAAATCCACCACCATGTACAAATTACCGACCCGGCAATCGTGGCGGCGG
CAACGCTTTCTCATCGTTATATTTCCGATCGTCAGTTGCCGGATAAAGCCATCGACTTAATCGACGAAGCAGCATCCAGC
ATTCGGATGGAAATCGACTCCAAACCGCAACCGTTAGATCGTTTGGATCGCCGTATTATCCAGCTCAAACTGGAACAACA
GGCGTTGCAAAAAGAAGATGACGATGCCAGCCGTAAACGTTTGGAAATGCTGGAAAAAGAATTGGCGGAAAAAGAACGTG
AATATGCCGAATTAGAAGAAGTGTGGAAATCGGAAAAAGCCGCGCTGTCCGGCACGCAACACATTAAAGCGGAATTGGAA
AATGCCCGCACGCAAATGGAACAAGCACGCCGCGCCGGTGATTTAAGCAAAATGTCCGAATTGCAATACGGCAAAATTCC
GGATTTGGAAAAACAATTAGCCCAAGCGGAAGGTGCCGAGGGCAAAGAAATGAGTCTGTTACGCTATCGCGTGACCGACG
AAGAAATCGCCGAAGTGCTTTCCCGCGCTACCGGTATTCCGGTCGCTAAAATGATGGAAGGCGAAAAAGAAAAATTATTG
CGCATGGAAGAATTCCTGCACAAACGGGTTATCGGTCAAAACGAAGCGGTGGATGCCGTGGCGAACGCTATTCGTCGTAG
CCGCGCCGGTCTTTCCGATCCGAATCGTCCGATTGGTTCCTTCTTATTCTTAGGTCCGACCGGTGTGGGTAAAACTGAGT
TGTGCAAAGCCTTGGCATCCTTCTTATTCGACAGCGAAGATGCCATGGTGCGTATTGATATGTCCGAGTTCATGGAAAAA
CACAGCGTGTCCCGTTTGGTGGGCGCACCTCCGGGCTATGTGGGCTATGAAGAAGGCGGTTACTTAACCGAAGCGGTGCG
TCGCCGTCCGTATTCCGTGATTTTGCTCGACGAAGTGGAAAAAGCGCATCACGATGTGTTTAACATTCTGTTGCAAGTGC
TGGACGACGGTCGTCTCACCGACGGACAAGGCAGAACCGTGGATTTCCGTAATACGGTGGTGATTATGACCTCCAACCTC
GGTTCCGACTTGATTCAGGAACACGCACAGGAAGGGTACGACACCGTGAAAAGCATGGTAATGGAAGTGGTCGGTCGTTA
TTTCCGTCCGGAATTTATCAACCGTATCGACGAAACCGTCATGTTCCACCCGTTGAACAAAGAAAATATTCGTCAAATCG
CCGATATTCAATTAAGACGCTTAACCCGTCGCATGGAAACCCATGGCTATGTGTTGAATTTTACCGATGCCACCCTCGAT
TTCATCAGCGACATCGGTTACGACCCGATTTTCGGTGCACGTCCGCTCAAACGGGCAATTCAACAAGAAATCGAAAATCC
GTTGGCACAACAAATTTTATCCGGCGCCTTGCTGCCTGATAAAGTGATTGATGTGGACTACGTGGACGGTCAAATTGTGG
CAAAACAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.605 |
100 |
0.473 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.593 |
100 |
0.43 |
| clpE | Streptococcus mutans UA159 |
49.269 |
79.907 |
0.394 |
| clpE | Streptococcus pneumoniae TIGR4 |
49.043 |
79.322 |
0.389 |
| clpE | Streptococcus pneumoniae R6 |
49.043 |
79.322 |
0.389 |
| clpE | Streptococcus pneumoniae Rx1 |
49.043 |
79.322 |
0.389 |
| clpE | Streptococcus pneumoniae D39 |
49.043 |
79.322 |
0.389 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.191 |
80.724 |
0.389 |