Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   BBH51_RS01910 Genome accession   NZ_CP016553
Coordinates   380742..381248 (-) Length   168 a.a.
NCBI ID   WP_005538559.1    Uniprot ID   A0A142G0T2
Organism   Aggregatibacter actinomycetemcomitans strain IDH781     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 375742..386248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBH51_RS01900 (BBH51_01900) - 377112..379054 (-) 1943 Protein_380 alpha/beta hydrolase -
  BBH51_RS01905 (BBH51_01905) - 379041..380279 (-) 1239 WP_005538561.1 DUF4123 domain-containing protein -
  BBH51_RS01910 (BBH51_01910) luxS 380742..381248 (-) 507 WP_005538559.1 S-ribosylhomocysteine lyase Regulator
  BBH51_RS01915 (BBH51_01915) - 381460..381945 (-) 486 WP_005538558.1 YqaA family protein -
  BBH51_RS01920 (BBH51_01920) - 381948..382553 (-) 606 WP_005538557.1 sugar O-acetyltransferase -
  BBH51_RS01925 (BBH51_01925) - 382553..383155 (-) 603 WP_005549003.1 beta-phosphoglucomutase family hydrolase -
  BBH51_RS01930 (BBH51_01930) - 383283..383663 (+) 381 WP_005549001.1 PRD domain-containing protein -
  BBH51_RS01950 (BBH51_01950) rep 384179..386194 (-) 2016 WP_005539108.1 DNA helicase Rep -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18944.70 Da        Isoelectric Point: 5.9223

>NTDB_id=160666 BBH51_RS01910 WP_005538559.1 380742..381248(-) (luxS) [Aggregatibacter actinomycetemcomitans strain IDH781]
MPLLDSFKVDHTRMKAPAVRIAKIMRTPKGDNITVFDLRFTIPNKENLPPKGIHTLEHLFAGFMRDHLNGKDVEIIDISP
MGCRTGFYMSLIGTPNEAQIAQAWAASMQDILNVKKQSEIPELNEYQCGTYTEHSLEEAHQIAQNVLDRGIGVNKNEDLT
LDESLLKQ

Nucleotide


Download         Length: 507 bp        

>NTDB_id=160666 BBH51_RS01910 WP_005538559.1 380742..381248(-) (luxS) [Aggregatibacter actinomycetemcomitans strain IDH781]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACCCGAATGAAGGCGCCTGCCGTACGTATTGCGAAGATCATGCGCAC
TCCAAAAGGAGACAATATCACCGTTTTTGATCTTCGTTTCACGATACCTAACAAAGAAAACTTGCCACCGAAAGGTATTC
ACACCCTTGAACATTTATTTGCCGGTTTTATGCGAGATCACTTAAATGGCAAGGATGTGGAAATTATCGATATTTCCCCG
ATGGGCTGTCGCACCGGTTTTTATATGTCCTTAATCGGCACGCCAAATGAAGCCCAAATCGCACAGGCGTGGGCAGCTTC
GATGCAGGATATTCTGAATGTAAAGAAACAAAGCGAAATCCCTGAACTAAATGAGTACCAATGCGGCACTTACACCGAGC
ATTCTTTGGAAGAAGCACATCAAATCGCACAAAATGTGTTAGATCGCGGTATCGGCGTAAATAAAAATGAAGATTTAACC
TTAGACGAAAGCTTATTAAAACAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A142G0T2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

72.619

100

0.726