Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ASL14_RS21995 Genome accession   NZ_CP013203
Coordinates   4694078..4695841 (-) Length   587 a.a.
NCBI ID   WP_134913461.1    Uniprot ID   A0A0S2S9H8
Organism   Paenibacillus sp. IHB B 3084     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4689078..4700841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASL14_RS28395 - 4689397..4689559 (+) 163 Protein_4309 flavin oxidoreductase -
  ASL14_RS21980 (ASL14_21460) - 4690481..4691701 (-) 1221 WP_134913458.1 PLP-dependent aminotransferase family protein -
  ASL14_RS21985 (ASL14_21465) - 4691759..4692181 (+) 423 WP_134913459.1 hypothetical protein -
  ASL14_RS21990 (ASL14_21470) rcrQ 4692235..4694085 (-) 1851 WP_134913460.1 ABC transporter ATP-binding protein Regulator
  ASL14_RS21995 (ASL14_21475) rcrP 4694078..4695841 (-) 1764 WP_134913461.1 ABC transporter ATP-binding protein Regulator
  ASL14_RS22000 (ASL14_21480) - 4695921..4696331 (-) 411 WP_134913462.1 MarR family transcriptional regulator -
  ASL14_RS22005 (ASL14_21485) - 4696660..4698135 (+) 1476 Protein_4315 PLP-dependent aminotransferase family protein -
  ASL14_RS22010 - 4698223..4698465 (+) 243 WP_134913463.1 hypothetical protein -
  ASL14_RS22015 (ASL14_21490) - 4698525..4700408 (-) 1884 WP_134913464.1 S8 family peptidase -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64897.32 Da        Isoelectric Point: 7.8198

>NTDB_id=160656 ASL14_RS21995 WP_134913461.1 4694078..4695841(-) (rcrP) [Paenibacillus sp. IHB B 3084]
MLKIFKYLKKNEWMLVFCSLAFIVVQVWLDLKLPDYMAEITTKLQREGTPMSELLIPGSYMLLCAVGSMVASIIVGYFAA
KVAAGLAMRLRAMVFDKTLSFSMEEMNSFSTASLITRTTNDVTQIQTIVALGLQVIVKAPILAVWAIVKIADKNWQWTAS
TGAAVAVLILMLSVIVIFALPSFQRIQRLTDNLNRVTREHLTGLRVVRAYNADQYQEEKFEQANIELTNTNLFANRLMAM
IGPGMTFIMSGLSVSIYWIGAYLINGAAVPDRIALFSNMVVFSSYAMQVVMAFMMVSMIFFLMPRASISAKRIMEVLNTQ
SSIMNGHETAGEKGVMGQVEFRNVSFKYPDAEEPVLREISFTAKRGETVAFIGATGSGKTSVINLIPRFYDVTEGEVLVN
GVNVKNYNQHALHNKIGYVPQKAVLFSGTVASNVSYGDNGRAEASEKLIQAAVGIAQGTEFVEKMDGQYQGRISQGGTNV
SGGQKQRLSIARAIYRQPEIYIFDDSFSALDYKTDRILRSALKKETDHATTLIVAQRIGTIKDADQIIVLEQGEIVGSGT
HDELMANCSTYQEIAYSQLSKEELVHG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=160656 ASL14_RS21995 WP_134913461.1 4694078..4695841(-) (rcrP) [Paenibacillus sp. IHB B 3084]
ATGCTAAAGATATTCAAATATCTCAAGAAAAATGAATGGATGCTCGTGTTTTGCAGCCTGGCTTTCATCGTTGTGCAGGT
TTGGCTTGATCTGAAGCTGCCTGATTATATGGCAGAAATTACGACCAAGCTGCAAAGGGAAGGAACGCCTATGTCGGAAC
TGCTGATTCCCGGCAGTTACATGCTGTTGTGTGCAGTCGGCAGTATGGTTGCATCTATTATTGTTGGCTATTTCGCGGCG
AAGGTGGCGGCAGGGCTGGCCATGCGTCTGCGTGCGATGGTGTTTGATAAGACCTTGTCCTTTTCAATGGAAGAGATGAA
CAGCTTTTCGACGGCAAGCCTCATCACCCGCACCACGAACGATGTTACCCAGATTCAAACGATCGTTGCGTTGGGACTGC
AGGTGATCGTCAAGGCACCGATTTTGGCCGTGTGGGCTATTGTGAAGATTGCGGATAAAAACTGGCAGTGGACCGCCTCT
ACAGGAGCGGCCGTGGCTGTTTTGATCCTGATGCTAAGTGTTATTGTTATTTTCGCCCTCCCCAGTTTCCAGCGAATCCA
GCGTCTCACCGATAATCTGAACAGGGTAACACGTGAGCATCTGACTGGACTTCGGGTGGTGCGCGCTTATAATGCAGATC
AGTATCAGGAGGAAAAGTTTGAGCAGGCCAACATCGAATTGACGAATACAAACCTGTTTGCGAACCGGTTAATGGCAATG
ATTGGCCCGGGTATGACCTTTATTATGTCGGGTCTGAGTGTCTCTATCTATTGGATCGGCGCTTACCTGATTAACGGGGC
GGCCGTGCCGGACCGCATTGCGCTGTTCTCCAATATGGTCGTATTCTCCTCTTATGCGATGCAGGTGGTCATGGCCTTTA
TGATGGTTAGTATGATTTTCTTCCTGATGCCTCGCGCTTCGATTTCTGCCAAACGGATCATGGAGGTATTGAACACCCAA
TCCAGCATCATGAACGGGCATGAGACGGCTGGAGAAAAAGGCGTTATGGGACAGGTGGAATTTCGTAATGTCAGCTTCAA
ATATCCGGACGCCGAGGAGCCCGTGCTCCGCGAGATTAGCTTTACGGCGAAACGGGGTGAGACAGTTGCCTTCATCGGCG
CGACTGGCAGCGGTAAAACCAGCGTAATCAATCTGATTCCCCGTTTCTATGATGTGACCGAGGGAGAAGTGCTCGTGAAT
GGTGTCAATGTCAAAAACTATAACCAGCATGCACTTCATAACAAAATCGGGTATGTCCCTCAGAAAGCCGTGCTTTTCAG
CGGTACAGTGGCATCCAACGTTTCGTACGGCGATAACGGAAGAGCAGAGGCTTCGGAGAAACTCATCCAGGCAGCCGTAG
GGATTGCCCAAGGCACGGAATTTGTCGAAAAAATGGACGGTCAGTATCAGGGACGGATTTCACAAGGTGGAACGAACGTA
TCAGGCGGTCAAAAGCAGCGTCTGTCCATTGCTCGTGCCATCTACCGTCAGCCGGAGATTTATATCTTCGATGATTCCTT
TTCAGCACTGGACTACAAAACAGACCGAATTCTGCGCTCGGCTCTCAAAAAAGAAACCGACCATGCTACCACACTCATTG
TTGCTCAGCGCATAGGCACCATTAAGGACGCTGACCAAATTATCGTACTGGAACAGGGTGAGATTGTAGGGAGCGGCACA
CATGATGAGCTGATGGCGAACTGCAGCACCTATCAGGAGATCGCTTATTCGCAGCTTTCAAAGGAGGAACTCGTACATGG
ATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S2S9H8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.588

100

0.537

Multiple sequence alignment