Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ASL14_RS16665 Genome accession   NZ_CP013203
Coordinates   3569765..3570718 (+) Length   317 a.a.
NCBI ID   WP_134912547.1    Uniprot ID   A0A0S2S721
Organism   Paenibacillus sp. IHB B 3084     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3564765..3575718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASL14_RS16650 (ASL14_16285) - 3567063..3567740 (-) 678 WP_134912541.1 ABC transporter ATP-binding protein -
  ASL14_RS16655 (ASL14_16290) - 3567846..3568763 (-) 918 WP_134912543.1 HAMP domain-containing sensor histidine kinase -
  ASL14_RS16660 (ASL14_16295) - 3568765..3569442 (-) 678 WP_134912545.1 response regulator transcription factor -
  ASL14_RS16665 (ASL14_16300) ceuB 3569765..3570718 (+) 954 WP_134912547.1 ABC transporter permease Machinery gene
  ASL14_RS16670 (ASL14_16305) - 3570708..3571658 (+) 951 WP_134912549.1 iron chelate uptake ABC transporter family permease subunit -
  ASL14_RS16675 (ASL14_16310) - 3571652..3572409 (+) 758 Protein_3278 ATP-binding cassette domain-containing protein -
  ASL14_RS16680 (ASL14_16315) - 3572422..3573405 (+) 984 WP_134912551.1 siderophore ABC transporter substrate-binding protein -
  ASL14_RS16685 (ASL14_16320) - 3573649..3574560 (+) 912 WP_134912553.1 aldo/keto reductase -
  ASL14_RS16690 (ASL14_16325) - 3574768..3575094 (+) 327 WP_044644532.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34806.80 Da        Isoelectric Point: 9.9012

>NTDB_id=160647 ASL14_RS16665 WP_134912547.1 3569765..3570718(+) (ceuB) [Paenibacillus sp. IHB B 3084]
MKLRYLILVFLILAFASVFIGVHDVTPLDLFHLTNDQAQVLLISRFPRLISIIIAGASMSICGLIMQQLTRNRFVSPTTA
GTMDAARLGVLMAIMVFGAAGFWTKMLTAFGFALAGTLIFMKILDKIRFKDPVFIPLVGLMFGGILNSVTTFFAYKYNLI
QSISSWMQGDFSLVMSGRYEMLYLSVPLVALAYIYANRFTIAGMGEDFAANLGVHYKRTVNVGLVIVALVSSVVILTVGT
IPFLGLVVPNLVSMYMGDNLKKSLAHTATLGAVFVLFCDILGRVIIYPYEISVGLTVGVIGSALFLYLLLRRRAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=160647 ASL14_RS16665 WP_134912547.1 3569765..3570718(+) (ceuB) [Paenibacillus sp. IHB B 3084]
ATGAAATTGCGTTATTTAATACTGGTTTTTCTGATACTGGCTTTCGCCTCGGTTTTTATTGGTGTTCATGATGTAACTCC
ACTTGATTTGTTCCACTTAACCAACGATCAGGCGCAGGTACTCCTGATTAGCAGATTCCCACGTTTGATCAGTATCATTA
TCGCAGGGGCGAGTATGAGTATCTGTGGGCTCATTATGCAGCAGCTTACCCGGAACCGATTTGTATCTCCCACCACTGCA
GGGACGATGGATGCGGCACGATTGGGTGTGCTGATGGCTATTATGGTGTTTGGAGCGGCGGGATTTTGGACGAAGATGCT
GACGGCTTTCGGGTTTGCCCTGGCGGGGACACTGATTTTCATGAAAATACTGGATAAAATCCGTTTCAAGGACCCGGTAT
TTATCCCGCTGGTCGGTTTAATGTTCGGGGGCATTTTAAATTCGGTGACGACTTTTTTCGCCTATAAATACAATCTGATC
CAGAGCATTTCCTCGTGGATGCAGGGTGATTTTTCACTGGTGATGAGTGGTCGCTATGAGATGCTGTATCTTAGTGTTCC
TTTGGTTGCATTAGCGTACATATATGCGAATCGTTTCACAATTGCAGGCATGGGCGAGGATTTTGCGGCAAATTTGGGCG
TACATTACAAGCGCACCGTCAACGTTGGTCTGGTGATCGTGGCTTTGGTTTCCTCCGTAGTCATATTGACCGTGGGAACG
ATCCCTTTTCTGGGGCTGGTTGTACCCAATCTGGTCAGCATGTATATGGGCGATAATCTGAAAAAAAGTTTGGCCCATAC
CGCGACCTTGGGCGCCGTCTTTGTGCTGTTTTGCGATATTTTGGGACGGGTCATCATTTATCCGTATGAAATATCTGTAG
GGCTTACGGTTGGTGTGATCGGAAGCGCGTTGTTCTTGTATTTGCTGTTGAGGAGAAGGGCTTATGAATCCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S2S721

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.429

99.369

0.511

Multiple sequence alignment