Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BBP08_RS02525 Genome accession   NZ_CP016501
Coordinates   497936..498376 (+) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain WC1535     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 492936..503376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBP08_RS02505 (BBP08_02375) - 493052..493561 (-) 510 WP_000870956.1 HdeD family acid-resistance protein -
  BBP08_RS02510 (BBP08_02380) gdhA 493729..495078 (+) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  BBP08_RS02515 (BBP08_02385) - 495148..495558 (+) 411 WP_000594935.1 peptide deformylase -
  BBP08_RS02520 (BBP08_02390) - 495595..497667 (-) 2073 WP_000726930.1 bifunctional metallophosphatase/5'-nucleotidase -
  BBP08_RS02525 (BBP08_02395) rcrR 497936..498376 (+) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BBP08_RS02530 (BBP08_02400) rcrP 498423..500240 (+) 1818 WP_069571452.1 ABC transporter ATP-binding protein Regulator
  BBP08_RS02535 (BBP08_02405) rcrQ 500230..501984 (+) 1755 WP_000851084.1 ABC transporter ATP-binding protein Regulator
  BBP08_RS02540 (BBP08_02410) - 502092..502718 (+) 627 WP_000449636.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=160495 BBP08_RS02525 WP_000431168.1 497936..498376(+) (rcrR) [Streptococcus agalactiae strain WC1535]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=160495 BBP08_RS02525 WP_000431168.1 497936..498376(+) (rcrR) [Streptococcus agalactiae strain WC1535]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411