Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SA40TW_RS07830 | Genome accession | NZ_CP013182 |
| Coordinates | 1565195..1565494 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain SA40TW | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1560195..1570494
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA40TW_RS07805 (SA40TW_07475) | gcvPA | 1561407..1562753 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SA40TW_RS07810 (SA40TW_07480) | gcvT | 1562773..1563864 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SA40TW_RS07815 (SA40TW_07485) | - | 1564023..1564547 (-) | 525 | WP_001015116.1 | shikimate kinase | - |
| SA40TW_RS07820 (SA40TW_07490) | - | 1564537..1564683 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SA40TW_RS07825 (SA40TW_07495) | comGF | 1564780..1565277 (-) | 498 | WP_001838632.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SA40TW_RS07830 (SA40TW_07500) | comGE | 1565195..1565494 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SA40TW_RS07835 (SA40TW_07505) | comGD | 1565481..1565927 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SA40TW_RS07840 (SA40TW_07510) | comGC | 1565905..1566216 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SA40TW_RS07845 (SA40TW_07515) | comGB | 1566230..1567300 (-) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SA40TW_RS07850 (SA40TW_07520) | comGA | 1567272..1568246 (-) | 975 | WP_000697218.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SA40TW_RS07855 (SA40TW_07525) | - | 1568298..1568921 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SA40TW_RS07860 (SA40TW_07530) | - | 1568918..1569247 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SA40TW_RS07865 (SA40TW_07535) | - | 1569247..1570233 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| SA40TW_RS07870 (SA40TW_07540) | - | 1570230..1570433 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=160397 SA40TW_RS07830 WP_000844413.1 1565195..1565494(-) (comGE) [Staphylococcus aureus strain SA40TW]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=160397 SA40TW_RS07830 WP_000844413.1 1565195..1565494(-) (comGE) [Staphylococcus aureus strain SA40TW]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |