Detailed information NTG0160358

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: A4W81_RS05575
• Genome accession: NZ_CP016465
• Coordinates: 1098620..1099666 (-)
• Length: 348 a.a.
• NCBI ID: WP_337962201.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.3
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1093620..1104666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W81_RS05550 (A4W81_05445)	rpsT	1093686..1093940 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
A4W81_RS05555 (A4W81_05450)	holA	1094009..1095037 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
A4W81_RS05560 (A4W81_05455)	comEC	1095099..1097141 (-)	2043	WP_337962200.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A4W81_RS05565 (A4W81_05460)	-	1097295..1097783 (-)	489	WP_011374770.1	ComE operon protein 2	-
A4W81_RS05570 (A4W81_05465)	comEA	1097841..1098548 (-)	708	WP_232320763.1	helix-hairpin-helix domain-containing protein	Machinery gene
A4W81_RS05575 (A4W81_05470)	sepM	1098620..1099666 (-)	1047	WP_337962201.1	SepM family pheromone-processing serine protease	Regulator
A4W81_RS05580 (A4W81_05475)	coaD	1099668..1100165 (-)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
A4W81_RS05585 (A4W81_05480)	rsmD	1100178..1100732 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
A4W81_RS05590 (A4W81_05485)	-	1100737..1101027 (-)	291	WP_076632420.1	YlbG family protein	-
A4W81_RS05595 (A4W81_05490)	-	1101051..1102070 (-)	1020	WP_337962202.1	CAP-associated domain-containing protein	-
A4W81_RS05600 (A4W81_05495)	-	1102149..1103335 (-)	1187	Protein_1082	FtsW/RodA/SpoVE family cell cycle protein	-
A4W81_RS05605 (A4W81_05500)	-	1103344..1103640 (-)	297	WP_011374778.1	YlaN family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38113.89 Da
• Isoelectric Point: 9.6357

>NTDB_id=160358 A4W81_RS05575 WP_337962201.1 1098620..1099666(-) (sepM) [Latilactobacillus sakei strain TMW 1.3]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQSLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDHQNNYAIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=160358 A4W81_RS05575 WP_337962201.1 1098620..1099666(-) (sepM) [Latilactobacillus sakei strain TMW 1.3]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAAGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATCATCAAAATAATTATGCAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (209-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44