Detailed information NTG0160153

Bioinformatically predicted

Overview

• Name: ccrB
• Type: Machinery gene
• Locus tag: FORC26_RS00185
• Genome accession: NZ_CP013132
• Coordinates: 42315..43940 (-)
• Length: 541 a.a.
• NCBI ID: WP_071624218.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain FORC_026
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
SCCmec	42315..45311	42315..43940	within	0

Gene organization within MGE regions

Location: 42315..45311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC26_RS00185 (FORC26_0033)	ccrB	42315..43940 (-)	1626	WP_071624218.1	cassette chromosome recombinase CcrB	Machinery gene
FORC26_RS00190 (FORC26_0034)	ccrA	43962..45311 (-)	1350	WP_000806248.1	cassette chromosome recombinase CcrA	Machinery gene

Sequence

Protein

• Length: 541 a.a.
• Molecular weight: 62472.45 Da
• Isoelectric Point: 9.7823

>NTDB_id=160153 FORC26_RS00185 WP_071624218.1 42315..43940(-) (ccrB) [Staphylococcus aureus strain FORC_026]
MDKMKKKLVGGYIRVSTERQVEGYSIEGQITQIEQYCQFNGYELVDIYADRGISGKSMNRPELQRMLNDAKNGKLDCVMV
YKTNRLARNTSDLLTIVEELHRQNVEFFSLSERMEVKNSTGKLMLQTLASFSEFERNTILENIYNGQHQRALKGYYQGNL
PLGYNNIPDNKKELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGNPFSINSITYILVNPFYIGKIQFAKY
KDWNEKRRKGLNDKPIIADGKHPPIISQELWDKVQSRKKQVSQKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKDG
TKKRIRYYSCSNFRNKGSKVCSANSVRADVIEKYVMDQILEIVKSDKVLKQVVERVNQDNQVDVAALNHDIAYKQQQFDE
VNIKLKNLVQTIEDNPDLTSALKPTIHQYETKLNDITNQMNQLKQQQNQEKPSYDTKQIAALLQRIFQNIESMDKSQLKA
LYLTVIDRIDIRKDENHKKQFYVTLKLNNEIIKQLFNNNNLDEVLLSTSSLFLPQTLYFQI

Nucleotide

• Length: 1626 bp

>NTDB_id=160153 FORC26_RS00185 WP_071624218.1 42315..43940(-) (ccrB) [Staphylococcus aureus strain FORC_026]
ATGGATAAAATGAAGAAAAAGCTTGTAGGAGGCTACATTCGCGTGTCCACAGAGAGACAAGTAGAGGGTTATAGCATCGA
GGGACAAATTACACAAATAGAGCAATATTGCCAATTCAACGGCTATGAACTCGTTGATATATATGCAGATCGGGGTATAT
CAGGAAAATCTATGAACCGTCCTGAATTACAGCGCATGTTAAATGATGCTAAAAATGGAAAATTAGACTGTGTTATGGTT
TATAAAACAAATCGTTTGGCACGTAATACTTCCGATTTACTTACAATCGTCGAAGAACTTCATCGTCAAAATGTTGAATT
TTTTAGCTTGTCTGAACGTATGGAAGTCAAAAATTCAACAGGCAAGTTAATGCTCCAGACACTTGCAAGTTTTTCCGAAT
TTGAAAGAAATACAATTTTAGAGAATATTTACAACGGGCAACATCAAAGAGCTTTAAAGGGCTATTATCAAGGCAATCTT
CCATTAGGATATAATAACATACCTGATAATAAAAAAGAATTAATGATTAATCAACATGAAGCTAACATCGTTAAATATAT
CTTTGAATCTTATGCCAAAGGTCATGGTTATCGTAAAATAGCCAATGCACTCAATCACAAAGGCTATGTGACTAAAAAAG
GCAATCCATTTAGTATCAATTCAATAACCTATATCTTAGTCAATCCATTCTACATTGGTAAAATTCAATTTGCGAAGTAC
AAAGATTGGAATGAAAAGCGTCGTAAAGGACTAAATGATAAACCTATTATAGCTGATGGTAAACACCCTCCTATTATTAG
TCAAGAATTATGGGATAAAGTCCAATCACGCAAAAAACAGGTCAGTCAAAAACCTCAAGTTCATGGGAAAGGAACCAATC
TATTAACAGGTATTATTCACTGCCCACAATGTGGTGCACCAATGGCAGCTAGTAACACAACGAACACATTGAAAGATGGT
ACTAAGAAGCGAATACGTTATTATTCTTGTAGTAACTTCCGAAACAAAGGCTCAAAAGTATGTTCTGCGAATAGCGTTAG
AGCCGATGTCATTGAGAAATACGTTATGGATCAAATACTTGAAATTGTCAAAAGCGATAAAGTTCTCAAACAAGTTGTCG
AACGTGTTAATCAAGATAATCAAGTCGATGTAGCTGCACTCAATCATGATATTGCTTATAAACAACAACAATTTGATGAA
GTAAACATCAAACTTAAAAATCTCGTTCAAACCATCGAAGACAATCCAGACTTAACATCTGCACTCAAACCAACCATTCA
TCAATATGAAACAAAACTGAATGATATTACAAACCAAATGAATCAACTCAAGCAGCAACAAAATCAAGAGAAACCATCTT
ATGATACGAAACAAATCGCTGCCCTATTACAACGAATATTTCAAAATATAGAATCCATGGATAAATCACAGCTCAAAGCA
TTATACCTAACGGTTATTGACCGTATTGATATTCGTAAAGACGAGAATCATAAAAAACAATTCTATGTCACTCTCAAGCT
CAATAATGAAATTATTAAACAACTTTTTAATAATAACAATCTAGACGAAGTGCTCCTCAGCACTTCGTCTTTGTTTTTGC
CTCAAACACTCTACTTTCAAATATAA

Domains

Predicted by InterproScan.

• Resolvase, N terminal domain (Resolvase) (11-154)

• Recombinase (Recombinase) (179-279)

• Ogr/Delta-like zinc finger (Ogr_Delta) (300-355)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrB	Staphylococcus aureus N315	80.627	100	0.808