Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | SE1039_RS06860 | Genome accession | NZ_CP013114 |
| Coordinates | 1427054..1428028 (-) | Length | 324 a.a. |
| NCBI ID | WP_056935680.1 | Uniprot ID | - |
| Organism | Staphylococcus equorum strain KS1039 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1422054..1433028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SE1039_RS06820 (SE1039_13690) | gcvT | 1422599..1423690 (-) | 1092 | WP_021339246.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SE1039_RS06825 (SE1039_13700) | - | 1423868..1424341 (-) | 474 | WP_230456625.1 | shikimate kinase | - |
| SE1039_RS06835 (SE1039_13720) | comGF | 1424548..1424991 (-) | 444 | WP_002507508.1 | competence type IV pilus minor pilin ComGF | - |
| SE1039_RS06840 (SE1039_13730) | - | 1424963..1425262 (-) | 300 | WP_056935677.1 | hypothetical protein | - |
| SE1039_RS14100 (SE1039_13740) | comGD | 1425249..1425695 (-) | 447 | WP_056935678.1 | competence type IV pilus minor pilin ComGD | - |
| SE1039_RS06850 (SE1039_13750) | comGC | 1425673..1425990 (-) | 318 | WP_056936206.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SE1039_RS06855 (SE1039_13760) | comGB | 1426015..1427082 (-) | 1068 | WP_056935679.1 | competence type IV pilus assembly protein ComGB | - |
| SE1039_RS06860 (SE1039_13770) | comGA | 1427054..1428028 (-) | 975 | WP_056935680.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SE1039_RS06865 (SE1039_13780) | - | 1428128..1428751 (-) | 624 | WP_002507502.1 | MBL fold metallo-hydrolase | - |
| SE1039_RS06870 (SE1039_13790) | - | 1428753..1429076 (-) | 324 | WP_002507501.1 | MTH1187 family thiamine-binding protein | - |
| SE1039_RS06875 (SE1039_13800) | - | 1429076..1430062 (-) | 987 | WP_002507500.1 | glucokinase | - |
| SE1039_RS06880 | - | 1430653..1430853 (-) | 201 | WP_002512453.1 | YqgQ family protein | - |
| SE1039_RS06885 (SE1039_13820) | - | 1430837..1432294 (-) | 1458 | WP_056935681.1 | rhomboid family protein | - |
| SE1039_RS06890 (SE1039_13830) | - | 1432309..1432848 (-) | 540 | WP_056935682.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37316.38 Da Isoelectric Point: 8.8694
>NTDB_id=160007 SE1039_RS06860 WP_056935680.1 1427054..1428028(-) (comGA) [Staphylococcus equorum strain KS1039]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
Nucleotide
Download Length: 975 bp
>NTDB_id=160007 SE1039_RS06860 WP_056935680.1 1427054..1428028(-) (comGA) [Staphylococcus equorum strain KS1039]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGTGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGTGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
61.111 |
100 |
0.611 |
| comGA | Staphylococcus aureus N315 |
61.111 |
100 |
0.611 |