Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   BBD27_RS01890 Genome accession   NZ_CP016394
Coordinates   361274..362080 (-) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ND07     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 356274..367080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBD27_RS10690 - 356286..356757 (+) 472 Protein_365 YgjV family protein -
  BBD27_RS01860 (BBD27_0375) - 356776..357597 (-) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  BBD27_RS01865 (BBD27_0376) - 357620..358276 (-) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  BBD27_RS01870 (BBD27_0377) - 358374..358715 (-) 342 WP_011680840.1 P-II family nitrogen regulator -
  BBD27_RS01875 (BBD27_0378) - 358726..359961 (-) 1236 WP_024704224.1 ammonium transporter -
  BBD27_RS01880 (BBD27_0379) rsmI 360098..360964 (-) 867 WP_024704223.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  BBD27_RS01885 (BBD27_0380) yabA 360967..361287 (-) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  BBD27_RS01890 (BBD27_0381) yaaT 361274..362080 (-) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  BBD27_RS01895 (BBD27_0382) - 362077..362952 (-) 876 WP_024704222.1 DNA polymerase III subunit delta' -
  BBD27_RS01900 (BBD27_0383) tmk 362961..363590 (-) 630 WP_002946312.1 dTMP kinase -
  BBD27_RS01905 (BBD27_0384) tpiA 363830..364588 (-) 759 WP_002946314.1 triose-phosphate isomerase -
  BBD27_RS01910 (BBD27_0385) tuf 364837..366033 (-) 1197 WP_002949971.1 elongation factor Tu -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=159955 BBD27_RS01890 WP_011680838.1 361274..362080(-) (yaaT) [Streptococcus thermophilus strain ND07]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=159955 BBD27_RS01890 WP_011680838.1 361274..362080(-) (yaaT) [Streptococcus thermophilus strain ND07]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414

Multiple sequence alignment