Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   A9256_RS06595 Genome accession   NZ_CP016391
Coordinates   1288289..1288729 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain FWL1402     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1283289..1293729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9256_RS06580 (A9256_06580) - 1283947..1284573 (-) 627 WP_065367301.1 GTP pyrophosphokinase -
  A9256_RS06585 (A9256_06585) rcrQ 1284681..1286435 (-) 1755 WP_000851080.1 ABC transporter ATP-binding protein Regulator
  A9256_RS06590 (A9256_06590) rcrP 1286425..1288242 (-) 1818 WP_000481818.1 ABC transporter ATP-binding protein Regulator
  A9256_RS06595 (A9256_06595) rcrR 1288289..1288729 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A9256_RS06600 (A9256_06600) - 1288998..1291070 (+) 2073 WP_000726914.1 surface-anchored 5'-nucleotidase -
  A9256_RS06605 (A9256_06605) - 1291107..1291517 (-) 411 WP_000594936.1 peptide deformylase -
  A9256_RS06610 (A9256_06610) gdhA 1291587..1292936 (-) 1350 WP_017647818.1 NADP-specific glutamate dehydrogenase -
  A9256_RS06615 (A9256_06615) - 1293104..1293613 (+) 510 WP_000870955.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=159911 A9256_RS06595 WP_000431168.1 1288289..1288729(-) (rcrR) [Streptococcus agalactiae strain FWL1402]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=159911 A9256_RS06595 WP_000431168.1 1288289..1288729(-) (rcrR) [Streptococcus agalactiae strain FWL1402]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411