Detailed information
Bioinformatically predicted
Overview
| Name | pilL-C | Type | Machinery gene |
| Locus tag | BBB50_RS07715 | Genome accession | NZ_CP016324 |
| Coordinates | 1653465..1653845 (+) | Length | 126 a.a. |
| NCBI ID | WP_000045526.1 | Uniprot ID | Q6BBL2 |
| Organism | Vibrio cholerae 2740-80 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1648465..1658845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBB50_RS07690 (BBB50_07690) | - | 1649057..1649713 (+) | 657 | WP_000974695.1 | HEAT repeat domain-containing protein | - |
| BBB50_RS07695 (BBB50_07695) | - | 1649724..1650569 (+) | 846 | WP_001002907.1 | CheR family methyltransferase | - |
| BBB50_RS07700 (BBB50_07700) | - | 1650569..1650940 (+) | 372 | WP_000757478.1 | response regulator | - |
| BBB50_RS07705 (BBB50_07705) | - | 1650949..1653222 (+) | 2274 | WP_043988652.1 | chemotaxis protein CheA | - |
| BBB50_RS07710 (BBB50_07710) | - | 1653212..1653472 (+) | 261 | WP_001143862.1 | hypothetical protein | - |
| BBB50_RS07715 (BBB50_07715) | pilL-C | 1653465..1653845 (+) | 381 | WP_000045526.1 | response regulator | Machinery gene |
| BBB50_RS07720 (BBB50_07720) | - | 1653853..1655088 (+) | 1236 | WP_000621946.1 | methyl-accepting chemotaxis protein | - |
| BBB50_RS07725 (BBB50_07725) | - | 1655143..1655457 (-) | 315 | WP_000312387.1 | DMT family transporter | - |
| BBB50_RS07730 (BBB50_07730) | - | 1655603..1657117 (-) | 1515 | WP_000411504.1 | cryptochrome/deoxyribodipyrimidine photo-lyase family protein | - |
| BBB50_RS07735 (BBB50_07735) | - | 1657273..1658679 (-) | 1407 | WP_000545341.1 | MDR family MFS transporter | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13674.04 Da Isoelectric Point: 9.8959
>NTDB_id=159705 BBB50_RS07715 WP_000045526.1 1653465..1653845(+) (pilL-C) [Vibrio cholerae 2740-80]
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
Nucleotide
Download Length: 381 bp
>NTDB_id=159705 BBB50_RS07715 WP_000045526.1 1653465..1653845(+) (pilL-C) [Vibrio cholerae 2740-80]
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL-C | Synechocystis sp. PCC 6803 |
39.2 |
99.206 |
0.389 |