Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AQ980_RS08465 | Genome accession | NZ_CP013055 |
| Coordinates | 1575983..1577026 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013180.1 | Uniprot ID | A0A9X5WLU9 |
| Organism | Bacillus thuringiensis strain YWC2-8 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1570983..1582026
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AQ980_RS08430 (AQ980_08570) | - | 1571351..1571839 (+) | 489 | WP_000764261.1 | hypothetical protein | - |
| AQ980_RS08435 (AQ980_08575) | - | 1571874..1572185 (-) | 312 | WP_001093237.1 | hypothetical protein | - |
| AQ980_RS08440 (AQ980_08580) | - | 1572438..1572653 (+) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| AQ980_RS08445 (AQ980_08585) | - | 1572741..1573133 (+) | 393 | WP_000875388.1 | hypothetical protein | - |
| AQ980_RS08450 (AQ980_08590) | - | 1573213..1574607 (-) | 1395 | WP_001094330.1 | L-cystine transporter | - |
| AQ980_RS08455 (AQ980_08595) | - | 1574714..1574956 (-) | 243 | WP_000440721.1 | DUF2626 domain-containing protein | - |
| AQ980_RS08460 (AQ980_08600) | - | 1575082..1575777 (-) | 696 | WP_000434125.1 | helix-turn-helix domain-containing protein | - |
| AQ980_RS08465 (AQ980_08605) | comGA | 1575983..1577026 (+) | 1044 | WP_001013180.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AQ980_RS08470 (AQ980_08610) | comGB | 1577019..1578050 (+) | 1032 | WP_000475193.1 | competence type IV pilus assembly protein ComGB | - |
| AQ980_RS08475 (AQ980_08615) | comGC | 1578062..1578361 (+) | 300 | WP_001178686.1 | competence type IV pilus major pilin ComGC | - |
| AQ980_RS08480 (AQ980_08620) | comGD | 1578358..1578813 (+) | 456 | WP_000813142.1 | competence type IV pilus minor pilin ComGD | - |
| AQ980_RS08485 (AQ980_08625) | - | 1578806..1579108 (+) | 303 | WP_000829473.1 | hypothetical protein | - |
| AQ980_RS08490 (AQ980_08630) | comGF | 1579078..1579548 (+) | 471 | WP_000923099.1 | competence type IV pilus minor pilin ComGF | - |
| AQ980_RS08495 (AQ980_08635) | comGG | 1579545..1579916 (+) | 372 | WP_001231273.1 | competence type IV pilus minor pilin ComGG | - |
| AQ980_RS08500 (AQ980_08640) | - | 1580093..1580743 (+) | 651 | WP_000183862.1 | 2OG-Fe(II) oxygenase | - |
| AQ980_RS08505 (AQ980_08645) | - | 1580859..1581356 (+) | 498 | WP_000836650.1 | shikimate kinase | - |
| AQ980_RS08510 (AQ980_08650) | - | 1581395..1581595 (+) | 201 | WP_000106083.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39157.52 Da Isoelectric Point: 8.5482
>NTDB_id=159495 AQ980_RS08465 WP_001013180.1 1575983..1577026(+) (comGA) [Bacillus thuringiensis strain YWC2-8]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=159495 AQ980_RS08465 WP_001013180.1 1575983..1577026(+) (comGA) [Bacillus thuringiensis strain YWC2-8]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |