Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   A9P84_RS14740 Genome accession   NZ_CP016030
Coordinates   3319938..3322115 (+) Length   725 a.a.
NCBI ID   WP_015961864.1    Uniprot ID   -
Organism   Legionella pneumophila strain OLDA     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3314938..3327115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9P84_RS14710 (A9P84_14705) - 3315410..3315853 (-) 444 WP_011216694.1 hypothetical protein -
  A9P84_RS14715 (A9P84_14710) - 3315935..3316921 (+) 987 WP_015961860.1 tRNA dihydrouridine synthase -
  A9P84_RS14720 (A9P84_14715) - 3316980..3317339 (-) 360 WP_015961861.1 hypothetical protein -
  A9P84_RS14725 (A9P84_14720) - 3317396..3318151 (-) 756 WP_021437054.1 pteridine reductase -
  A9P84_RS14730 (A9P84_14725) - 3318328..3319440 (+) 1113 WP_015961863.1 class I SAM-dependent methyltransferase -
  A9P84_RS14735 (A9P84_14730) - 3319443..3319937 (+) 495 WP_011216699.1 6-pyruvoyl trahydropterin synthase family protein -
  A9P84_RS14740 (A9P84_14735) priA 3319938..3322115 (+) 2178 WP_015961864.1 primosomal protein N' Machinery gene
  A9P84_RS14745 (A9P84_14740) - 3322112..3322504 (+) 393 WP_015961865.1 acyl-CoA thioesterase -
  A9P84_RS14750 (A9P84_14745) - 3322622..3322891 (-) 270 WP_013102003.1 hypothetical protein -
  A9P84_RS14755 (A9P84_14750) thyA 3322967..3323761 (-) 795 WP_015961866.1 thymidylate synthase -
  A9P84_RS14760 (A9P84_14755) lgt 3323758..3324528 (-) 771 WP_021437013.1 prolipoprotein diacylglyceryl transferase -
  A9P84_RS14765 (A9P84_14760) - 3324546..3325352 (-) 807 WP_015961868.1 sulfite exporter TauE/SafE family protein -

Sequence

Protein


Download         Length: 725 a.a.        Molecular weight: 81621.01 Da        Isoelectric Point: 9.2815

>NTDB_id=159078 A9P84_RS14740 WP_015961864.1 3319938..3322115(+) (priA) [Legionella pneumophila strain OLDA]
MNDIYQVCIPHTNRDCFDYEALDLTPCIGGRVWVPFRNQARVGIVINKVCGQQTGHSLKKITSIIDEKPLVPEDLLELCL
WVGSYYQSPLSEVIPLVIPKKYRLGLPCSLPTEDFYQLNIPVEKAKTLISKKAKKQHELIDFLSRHQKGISKQTLKQHGY
NGNQIATLLACQAINLSQQVTLPTKIPEKLSPPLTLNPEQAVAVASILEHIHHYQCFLLQGVTGSGKTEVYLHVIAKILE
QGKQVLVLVPEIGLTPQLLSRFTARFNHPITVLHSNLNESERQIAWQLAKENKVKMVIGTRSAVFTPLPNLGLIIIDEEH
DSSLKQMEGVRYSARDTALMRAHLANIPIILGTATPSLETIHNCKQKKYNLLRLTHKAASTTPLHYQLIDLRSQMVQHGL
ALPTLKIIENHLLQQNQVLVFINRRGFAPVLLCHQCGWMVDCKACDSHLTLHKQAGQMICHHCGLTQRIPLFCNNCQSKE
LIPVGSGTQRIYEFLSHQFPDTNVLRIDRDEVRKKNSLNSHLDKINKGEAQLIIGTQMLAKGHHFPRLSLVVVVDADAGF
YNQDFRAIEHLGQLLTQVSGRAGRAEHPGQVLIQTYLPDHPLLNLLIQHGYDEFANALLISRQEAEMPPFQFLAVIRAQG
KTVNKVDQFLKATKDQIQAHPLTVLGPAPAPLPRKANQHRMQLLIKSPSRKVLKSSLTQLREWLTMNKLSNGIRWNVDVD
PMDLS

Nucleotide


Download         Length: 2178 bp        

>NTDB_id=159078 A9P84_RS14740 WP_015961864.1 3319938..3322115(+) (priA) [Legionella pneumophila strain OLDA]
ATGAACGATATTTATCAAGTTTGTATCCCCCATACCAATCGAGATTGTTTTGATTACGAAGCCCTGGATTTAACTCCATG
CATTGGTGGAAGAGTATGGGTTCCTTTTCGCAATCAAGCCCGAGTGGGCATTGTAATCAATAAAGTTTGTGGCCAGCAAA
CGGGCCATTCGTTAAAGAAAATCACTTCAATAATCGATGAGAAACCTCTGGTTCCTGAAGATCTCTTAGAGCTTTGTCTA
TGGGTAGGAAGTTATTATCAGTCACCATTATCTGAAGTGATTCCTTTGGTAATACCCAAAAAATATCGCCTGGGTTTGCC
TTGCTCACTACCTACAGAAGATTTTTATCAATTGAATATCCCTGTTGAAAAGGCGAAGACACTCATCTCGAAAAAAGCAA
AAAAACAACATGAATTGATTGATTTTTTAAGCAGACACCAGAAAGGAATTTCCAAACAGACCCTAAAACAACATGGCTAC
AACGGAAATCAAATTGCGACACTACTTGCTTGTCAAGCCATTAACCTGTCACAGCAAGTTACCTTGCCAACCAAAATTCC
TGAAAAACTCAGTCCACCGTTAACACTCAATCCTGAACAAGCCGTTGCCGTAGCTTCCATTTTAGAACACATCCATCATT
ACCAATGCTTTTTACTGCAAGGTGTTACCGGAAGTGGTAAGACAGAGGTTTATTTGCATGTCATTGCCAAAATATTGGAG
CAAGGCAAACAAGTATTGGTGCTGGTACCAGAAATCGGGTTAACCCCTCAGCTTTTATCTCGTTTTACAGCCCGATTTAA
CCATCCCATAACCGTATTACATTCCAATTTGAATGAATCAGAAAGGCAAATTGCCTGGCAGCTGGCAAAAGAGAACAAAG
TTAAAATGGTGATTGGAACTCGTTCTGCCGTTTTTACCCCTCTGCCCAATCTCGGTTTAATTATCATCGATGAAGAGCAT
GACAGTTCGCTCAAACAAATGGAAGGGGTGCGTTATTCTGCGCGAGATACTGCTTTAATGCGTGCTCATCTTGCCAATAT
TCCTATCATTCTTGGTACAGCCACTCCCAGTCTGGAAACCATCCACAACTGCAAACAAAAAAAATATAATTTATTACGCT
TAACGCATAAAGCTGCCTCCACTACACCATTACACTATCAACTGATTGATTTAAGATCGCAAATGGTACAGCATGGCTTG
GCTCTCCCAACCCTTAAAATCATAGAAAATCATTTGCTGCAACAAAACCAGGTTCTTGTTTTCATTAACCGACGCGGCTT
TGCCCCAGTGTTACTTTGCCATCAATGTGGATGGATGGTTGATTGCAAAGCATGCGATAGCCATTTAACCTTGCATAAAC
AGGCAGGACAAATGATTTGTCATCATTGCGGATTAACCCAAAGAATACCTTTGTTTTGCAATAACTGCCAAAGCAAGGAA
TTAATCCCCGTAGGATCTGGCACCCAGAGAATTTATGAGTTTTTAAGCCATCAGTTTCCAGATACAAATGTTTTACGAAT
TGACCGAGATGAGGTTCGTAAAAAAAATTCTCTAAACAGCCATTTGGACAAAATTAATAAAGGGGAAGCTCAGCTGATCA
TAGGCACTCAAATGCTAGCCAAGGGGCACCATTTCCCCCGCCTATCCCTGGTCGTTGTCGTAGATGCTGATGCAGGCTTT
TACAACCAGGATTTCCGGGCTATTGAACATTTGGGACAATTATTAACTCAAGTATCTGGACGAGCTGGGCGAGCAGAACA
TCCCGGGCAAGTATTGATTCAAACTTATTTACCTGATCATCCCCTGCTTAATCTACTCATTCAGCATGGGTATGATGAAT
TTGCAAACGCTTTATTAATTTCAAGACAAGAGGCTGAAATGCCCCCTTTTCAGTTTTTAGCGGTCATCAGAGCTCAGGGC
AAAACCGTCAACAAGGTGGATCAATTCCTAAAAGCAACCAAAGATCAAATTCAGGCTCATCCTCTCACGGTACTGGGTCC
TGCGCCAGCTCCTTTGCCACGAAAAGCTAACCAGCATAGGATGCAACTATTAATTAAATCCCCTTCAAGAAAAGTTCTAA
AAAGTTCATTGACGCAATTAAGAGAGTGGTTGACAATGAACAAATTAAGTAATGGCATCCGCTGGAATGTGGACGTTGAT
CCTATGGACTTATCATGA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(489-585)

3DNA-binding domain (3BD) (PriA_3primeBD)

(6-99)

PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA)

(442-468)

Primosomal protein N C-terminal domain (PriA_C)

(629-721)

Type III restriction enzyme, res subunit (ResIII)

(195-357)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

42.355

100

0.432

Multiple sequence alignment