Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A9P84_RS13315 Genome accession   NZ_CP016030
Coordinates   2995215..2996006 (-) Length   263 a.a.
NCBI ID   WP_014844714.1    Uniprot ID   -
Organism   Legionella pneumophila strain OLDA     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2990215..3001006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9P84_RS13305 (A9P84_13300) legS1 2991362..2992519 (-) 1158 WP_015961696.1 Dot/Icm T4SS effector LegS1 -
  A9P84_RS13310 (A9P84_13305) dacB 2993330..2995123 (-) 1794 WP_014844713.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  A9P84_RS13315 (A9P84_13310) spo0J 2995215..2996006 (-) 792 WP_014844714.1 ParB/RepB/Spo0J family partition protein Regulator
  A9P84_RS13320 (A9P84_13315) ceg33 2996123..2996626 (-) 504 WP_014844715.1 Dot/Icm T4SS effector Ceg33 -
  A9P84_RS13325 (A9P84_13320) - 2996799..2997548 (-) 750 WP_014842652.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  A9P84_RS13330 (A9P84_13325) rsmB 2997545..2998828 (-) 1284 WP_015961697.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  A9P84_RS13335 (A9P84_13330) fmt 2998825..2999769 (-) 945 WP_015961698.1 methionyl-tRNA formyltransferase -
  A9P84_RS13340 (A9P84_13335) def 2999766..3000278 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30113.25 Da        Isoelectric Point: 5.7320

>NTDB_id=159071 A9P84_RS13315 WP_014844714.1 2995215..2996006(-) (spo0J) [Legionella pneumophila strain OLDA]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFG
HARVLVGLNPEQQEMFAHQIIGEEWSVRYLEQEIKSYKNKDTNSPKNPRKDRDIERLQTILAEQVGAPVQIVNDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=159071 A9P84_RS13315 WP_014844714.1 2995215..2996006(-) (spo0J) [Legionella pneumophila strain OLDA]
ATGCAAACCCGATTTACTTATTTACCTGTTACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCCTTGGTGGTAAGACCTATAGCAAAAGAGC
GATATGAAATTATTGCGGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATCGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCAGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCCTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGTGTTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAACAGCAAGAAATGTTTGCTCACCAGATTATTGGAGAGGAATGGTCTGT
CAGATACTTAGAGCAAGAAATTAAATCTTATAAAAATAAAGATACGAACAGTCCCAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCCTGGCTGAACAAGTGGGGGCTCCTGTACAAATTGTAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGATTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

37.692

98.859

0.373