Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAST40_RS07350 | Genome accession | NZ_CP012979 |
| Coordinates | 1527352..1527651 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain ST20130940 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1522352..1532651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST40_RS07325 (SAST40_01541) | gcvPA | 1523564..1524910 (-) | 1347 | WP_000019689.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAST40_RS07330 (SAST40_01542) | gcvT | 1524930..1526021 (-) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAST40_RS07335 (SAST40_01543) | - | 1526180..1526704 (-) | 525 | WP_001015123.1 | shikimate kinase | - |
| SAST40_RS07340 | - | 1526694..1526840 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAST40_RS07345 (SAST40_04495) | comGF | 1526937..1527434 (-) | 498 | WP_029642894.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAST40_RS07350 (SAST40_03407) | comGE | 1527352..1527651 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SAST40_RS07355 (SAST40_03408) | comGD | 1527638..1528084 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAST40_RS07360 (SAST40_03409) | comGC | 1528062..1528373 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAST40_RS07365 (SAST40_03938) | comGB | 1528387..1529457 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SAST40_RS07370 (SAST40_01549) | comGA | 1529429..1530403 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAST40_RS07375 (SAST40_04496) | - | 1530428..1532074 (-) | 1647 | WP_000277718.1 | IS1182 family transposase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=158900 SAST40_RS07350 WP_000844413.1 1527352..1527651(-) (comGE) [Staphylococcus aureus strain ST20130940]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=158900 SAST40_RS07350 WP_000844413.1 1527352..1527651(-) (comGE) [Staphylococcus aureus strain ST20130940]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |