Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAST42_RS07445 | Genome accession | NZ_CP012976 |
| Coordinates | 1534730..1535029 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain ST20130942 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1529730..1540029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST42_RS07420 (SAST42_03902) | gcvPA | 1530942..1532288 (-) | 1347 | WP_000019678.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAST42_RS07425 (SAST42_03903) | gcvT | 1532308..1533399 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAST42_RS07430 (SAST42_01499) | - | 1533558..1534082 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| SAST42_RS07435 (SAST42_04354) | - | 1534072..1534218 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAST42_RS07440 (SAST42_03523) | comGF | 1534315..1534812 (-) | 498 | WP_029694076.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAST42_RS07445 (SAST42_04434) | comGE | 1534730..1535029 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SAST42_RS07450 (SAST42_03525) | comGD | 1535016..1535462 (-) | 447 | WP_072433556.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAST42_RS07455 (SAST42_03526) | comGC | 1535440..1535751 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAST42_RS07460 (SAST42_04047) | comGB | 1535765..1536835 (-) | 1071 | Protein_1430 | competence type IV pilus assembly protein ComGB | - |
| SAST42_RS07465 (SAST42_01506) | comGA | 1536807..1537781 (-) | 975 | WP_000697235.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAST42_RS07470 (SAST42_01507) | - | 1537833..1538456 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SAST42_RS07475 (SAST42_01508) | - | 1538453..1538782 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SAST42_RS07480 (SAST42_01509) | - | 1538782..1539768 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| SAST42_RS07485 (SAST42_03528) | - | 1539765..1539968 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=158817 SAST42_RS07445 WP_000844413.1 1534730..1535029(-) (comGE) [Staphylococcus aureus strain ST20130942]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=158817 SAST42_RS07445 WP_000844413.1 1534730..1535029(-) (comGE) [Staphylococcus aureus strain ST20130942]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |