Detailed information NTG0158680

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: A9Y60_RS10470
• Genome accession: NZ_CP016016
• Coordinates: 1938580..1941687 (+)
• Length: 1035 a.a.
• NCBI ID: WP_180364597.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 34530
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1933580..1946687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9Y60_RS10450 (A9Y60_10450)	-	1934277..1934726 (-)	450	WP_003692085.1	CopD family copper resistance protein	-
A9Y60_RS10455 (A9Y60_10455)	waaA	1934767..1936038 (-)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
A9Y60_RS10460 (A9Y60_10460)	gnd	1936101..1937549 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
A9Y60_RS10465 (A9Y60_10465)	-	1937629..1937892 (-)	264	WP_017147189.1	hypothetical protein	-
A9Y60_RS10470 (A9Y60_10470)	pilC	1938580..1941687 (+)	3108	WP_180364597.1	PilC family type IV pilus tip adhesin	Machinery gene
A9Y60_RS10480 (A9Y60_10480)	-	1942339..1942623 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
A9Y60_RS10485 (A9Y60_10485)	yccS	1943107..1945257 (-)	2151	WP_003697785.1	YccS family putative transporter	-
A9Y60_RS10490 (A9Y60_10490)	pilU	1945374..1946600 (-)	1227	WP_003697786.1	PilT/PilU family type 4a pilus ATPase	Machinery gene

Sequence

Protein

• Length: 1035 a.a.
• Molecular weight: 112925.33 Da
• Isoelectric Point: 9.9148

>NTDB_id=158680 A9Y60_RS10470 WP_180364597.1 1938580..1941687(+) (pilC) [Neisseria gonorrhoeae strain 34530]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGAMAQTHQYAIIMNGRNQPEVKQNVPSSIKDKDRRREYTYYTHRTGGGSVS
FNNNDTLVSQQSGTAVFGTATYLPPYGKVSGFDADALKERNNAVDWIRTTRIALAGYSYIDVICRSYTGCPKLVYKTRFT
FGQQGLKRKAGSKLDIYEDKSRENSPIYKLSDYPWLGVSFNLGSENTVQNSKLFNKLISSFREGNNNQTIVSTTEGNPIS
LGDRQREHTAVAYYLNAKLHLLDKKGIEDIAQGKIVDLGILKPHVETTGRSLLDFWARWDIKDTGQIPVKLGLPQVKAGR
CTNKPNPNNNTKAPSPALTAPALWFGPGQDGKAEMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIKS
RQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPDNDNKF
KSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDIQ
SQESTLAKELRAFAEKGYVGDRYGVDGGFVLRQVELSGQKHVFMFGAMGFGGRGAYALDLSKINGNYPAAAPLFDVKNGD
KNGKNGKNRVEVELGYTVGTPQIGKIRNGKYAAFLASGYAAKQIASQENKTALYVYDLKDTLGTPIAKIEVKGGKGGLSS
PTLVDKDLDGIVDIAYAGDRGGNMYRFDLSNSDPSKWSVSTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLTEDDVLDT
KEQYIYGIFDDDKAANNVNASRGVLGSGLLEQHLTQENKTLFLNKRSDGSGSKGWAVKLTGGRRVTVKPTVVLRTAFVTI
RSYTGNDKCGAQTAILGINTADGGALTPRSARPIVPEANTAVAQYSGHKKTAGGKSVPIGCMWKNSKTVCPNGYVYDKPV
NVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3108 bp

>NTDB_id=158680 A9Y60_RS10470 WP_180364597.1 1938580..1941687(+) (pilC) [Neisseria gonorrhoeae strain 34530]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGCGATGGCGCAAACCCATCAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGCAGAATG
TGCCATCTTCAATAAAGGACAAAGACAGGAGGCGCGAATATACTTATTATACGCACAGAACAGGAGGAGGCTCTGTCTCA
TTCAACAATAACGATACCCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGG
CAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCAACAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGC
TGGCAGGCTACTCCTACATCGACGTCATATGCAGAAGCTACACAGGCTGTCCCAAACTTGTCTATAAAACCCGATTTACC
TTCGGTCAACAAGGGTTGAAAAGAAAGGCAGGCAGCAAGCTGGATATATACGAAGACAAAAGCCGCGAAAATTCGCCCAT
TTACAAATTGTCGGATTATCCTTGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCCAAAATAGCAAATTAT
TCAACAAATTGATATCTTCTTTTAGAGAAGGCAATAATAATCAAACCATCGTCTCTACGACAGAAGGCAACCCTATTTCC
CTTGGCGACCGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAGGGAT
TGAAGATATCGCCCAAGGCAAAATAGTGGATTTGGGTATCTTGAAACCGCACGTCGAGACGACAGGACGAAGCTTGCTAG
ATTTTTGGGCTAGGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAAGCAGGCCGC
TGCACCAACAAACCGAACCCCAATAATAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGACC
CGGGCAAGATGGTAAGGCGGAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGAGCAGCCGCATCTTCCTCC
AAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAAAGT
CGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAA
GGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGA
ACGTCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTT
AAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGGCGA
CATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAA
AAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCAAGGATATTCAA
AGCCAAGAATCCACCCTTGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGG
CGGCTTTGTCTTGCGCCAAGTCGAACTGAGCGGGCAAAAACACGTGTTTATGTTCGGCGCGATGGGTTTTGGCGGCAGGG
GCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCTCCCCTGTTTGATGTCAAAAATGGCGAT
AAAAACGGCAAAAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAATCCG
CAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAACAAATTGCCAGCCAAGAAAATAAAACCGCGCTGT
ATGTGTATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGGCGGCAAAGGCGGGCTTTCGTCC
CCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGGAATATGTACCGCTT
TGATTTGAGCAATTCCGATCCTAGTAAATGGTCTGTAAGCACTATTTTCGAAGGCGGGAAGCCGATTACCTCCGCGCCCG
CCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACCGAAGATGATGTACTCGATACG
AAAGAACAATATATTTACGGTATCTTTGACGACGATAAGGCGGCGAATAATGTAAATGCAAGCCGCGGCGTTTTGGGGAG
CGGGCTGCTCGAGCAACACCTTACTCAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGTTCGGGCAGCAAGG
GCTGGGCGGTGAAATTGACAGGCGGACGGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTCACCATC
CGTAGCTATACGGGTAATGACAAATGCGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGAC
TCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATACGGCTGTCGCACAATATTCCGGCCATAAGAAAACCGCCGGCG
GCAAGTCCGTCCCCATAGGCTGCATGTGGAAAAACAGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTT
AATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGA
CCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGG
ACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (505-844)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	74.81	100	0.76