Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI16_RS05360 | Genome accession | NZ_CP012957 |
| Coordinates | 1005908..1006210 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ001CC354 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1000908..1011210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI16_RS05335 (AEI16_05295) | rpsR | 1001271..1001531 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI16_RS05340 (AEI16_05300) | lon | 1001591..1003966 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI16_RS05345 (AEI16_05305) | - | 1003983..1004630 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| AEI16_RS05350 (AEI16_05310) | fliW | 1004791..1005180 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI16_RS05355 (AEI16_05315) | proC | 1005180..1005911 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI16_RS05360 (AEI16_05320) | ctsT | 1005908..1006210 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI16_RS05365 (AEI16_05325) | - | 1006207..1006869 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI16_RS05370 (AEI16_05330) | - | 1006866..1007318 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI16_RS05375 (AEI16_05335) | hemD | 1007315..1007944 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI16_RS05380 (AEI16_05340) | thiE | 1007922..1008554 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI16_RS05385 (AEI16_05345) | thiD | 1008544..1009356 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI16_RS05390 (AEI16_05350) | - | 1009353..1010039 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI16_RS05395 (AEI16_05355) | - | 1010036..1010797 (-) | 762 | WP_002867190.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=158554 AEI16_RS05360 WP_002853046.1 1005908..1006210(+) (ctsT) [Campylobacter jejuni strain CJ001CC354]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=158554 AEI16_RS05360 WP_002853046.1 1005908..1006210(+) (ctsT) [Campylobacter jejuni strain CJ001CC354]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |